Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001255705.1 | Gene: | lev-1 / 178269 | WormBaseID: | WBGene00002974 | Length: | 507 | Species: | Caenorhabditis elegans |
Alignment Length: | 529 | Identity: | 248/529 - (46%) |
---|---|---|---|
Similarity: | 332/529 - (62%) | Gaps: | 65/529 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 SWLLCSILVLVAFSL--VSASED---EERLVRDLFRGYNKLIRPVQNMTQ-KVGVRFGLAFVQLI 65
Fly 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKS 130
Fly 131 NVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSD 195
Fly 196 YWKSGTWDIIEVPAYLNVYEGDSNHPTETDITFYIIIRRKTLFYTVNLILPTVLISFLCVLVFYL 260
Fly 261 PAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVIIINWNF 325
Fly 326 RGPRTHRMPMYIRSIFLHYLPAFLFMKRPRKTRL-----RWMMEMPGMSMPAHPHPSYGSPAELP 385
Fly 386 KHISAIGGKQSKMEVMELSDLHHPNCKINRKVNSGGELGLGDGCRRESESSDSI--LLSPEASKA 448
Fly 449 TEAVEFIAEHLRNEDLYIQTREDWKYVAMVIDRLQLYIFFIVTTAGTVGILMDAPHIFEYVDQD- 512
Fly 513 ---RIIEIY 518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 242/504 (48%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 109/208 (52%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 114/261 (44%) | ||
lev-1 | NP_001255705.1 | LIC | 15..474 | CDD:273305 | 242/506 (48%) |
Neur_chan_LBD | 38..238 | CDD:280998 | 109/208 (52%) | ||
Neur_chan_memb | 245..470 | CDD:280999 | 114/261 (44%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 212 | 1.000 | Domainoid score | I1614 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 473 | 1.000 | Inparanoid score | I828 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG29100 | |
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0010013 | |
OrthoInspector | 1 | 1.000 | - | - | otm14101 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_112323 | |
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X7649 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.980 |