Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000742.1 | Gene: | CHRND / 1144 | HGNCID: | 1965 | Length: | 517 | Species: | Homo sapiens |
Alignment Length: | 522 | Identity: | 195/522 - (37%) |
---|---|---|---|
Similarity: | 293/522 - (56%) | Gaps: | 74/522 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 CKSWLLCSILVLVAFSLVSASEDEERLVRDLF--RGYNKLIRPVQNMTQKVGVRFGLAFVQLINV 67
Fly 68 NEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNV 132
Fly 133 LIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL----YNNKNF--- 190
Fly 191 ---VDLSDYWKSGTWDIIEVPAYLNV-YEGDSNHPTETDITFYIIIRRKTLFYTVNLILPTVLIS 251
Fly 252 FLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILV 316
Fly 317 TVIIINWNFRGPRTHRMPMYIRSIFLHYLPAFLFMKRPRKTRLRWMMEMPGMSMPAHPHPSYGSP 381
Fly 382 AELPKHISAIG--GK-------QSKMEVM--ELSDLHHPNCKINRKVNSGGELGLGDGCRRESES 435
Fly 436 SDSIL--LSPEASKATEAVEFIAEHLRNEDLYIQTREDWKYVAMVIDRLQLYIFFIVTTAGTVGI 498
Fly 499 LM 500 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 193/517 (37%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 95/220 (43%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 90/267 (34%) | ||
CHRND | NP_000742.1 | Neur_chan_LBD | 25..246 | CDD:308532 | 95/220 (43%) |
Neur_chan_memb | 253..489 | CDD:308533 | 90/268 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |