Sequence 1: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001241879.1 | Gene: | chrng / 100536659 | ZFINID: | ZDB-GENE-030131-3805 | Length: | 540 | Species: | Danio rerio |
Alignment Length: | 534 | Identity: | 183/534 - (34%) |
---|---|---|---|
Similarity: | 277/534 - (51%) | Gaps: | 58/534 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MESSCKSWLLCSILVLVAFSLVSASEDEERLVRDLFRGYNKLIRPVQNMTQKVGVRFGLAFVQLI 65
Fly 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEAD----YGGIGVLRLPPDKVWKPDIVLFNNADGNYEV 126
Fly 127 RYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNF- 190
Fly 191 -----VDLSDYWKSGTWDIIEVPAYLNV---YEGDSNHPTETDITFYIIIRRKTLFYTVNLILPT 247
Fly 248 VLISFLCVLVFYLPAEA-GEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNT 311
Fly 312 VSILVTVIIINWNFRGPRTHRMPMYIRSIFLHYLPAFLFMKRPRKTRLRWMMEMP---------- 366
Fly 367 -GMSMPAHPHPSYGSPAELPKHISAIGGKQSKMEVMELSDLHHPNCKINRKVNSGGEL------- 423
Fly 424 --GLGDGCRRESESSDSILLSPEASKATEAVEFIAEHLRNEDLYIQTREDWKYVAMVIDRLQLYI 486
Fly 487 FFIVTTAGTVGILM 500 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 181/525 (34%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 88/220 (40%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 83/275 (30%) | ||
chrng | NP_001241879.1 | LIC | 21..511 | CDD:273305 | 178/513 (35%) |
Neur_chan_LBD | 27..246 | CDD:280998 | 88/220 (40%) | ||
Neur_chan_memb | 253..509 | CDD:280999 | 84/276 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |