DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15020 and nyo

DIOPT Version :10

Sequence 1:NP_647901.1 Gene:CG15020 / 38544 FlyBaseID:FBgn0035543 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster


Alignment Length:795 Identity:150/795 - (18%)
Similarity:257/795 - (32%) Gaps:270/795 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SVVLMMLLV---------ELQQPISGLEQSTD-YSVVSKTAGVATTTSAPPTLVPPLRIFKGRIQ 69
            :::|::.|:         :.::|:..::|:.. .:|......||::.|:.|              
  Fly     7 TLLLLICLIASDAASAARKTKRPVKPVKQTNPRTNVTPSPPAVASSGSSTP-------------- 57

  Fly    70 TTTPSTRSTSGT--------------------RPLATGAEAQKE----------------LVG-- 96
            .:|.||.:|.|:                    :||.|..|||.|                ::|  
  Fly    58 ASTSSTTTTEGSGDQEVATVGSAALAGGGELPKPLVTPIEAQPEAKTDKAPALEEECDPDMIGFE 122

  Fly    97 ISSKSYISGPT----TQPSKL--------------------------------SKRAGLAGPKKF 125
            |.:...:|.|:    |.|..|                                .|..|.....:|
  Fly   123 IITGYVLSAPSKMLDTLPGTLMLTDCLEACQSNESCSAVNYETGLCVLFKTTADKLPGSLSRSQF 187

  Fly   126 P----------KDVRNRSSNALERNKLQ-HEVPDHVPDSSGYIPHRIGHPVHLDYGPTGVDSSGA 179
            |          ..|| ..|.|...:::| :.:|:||..|...:..|  ..:.|..|.|......|
  Fly   188 PVFTIYAQKSCLGVR-PCSKAWCIDRVQGYRLPEHVKSSQTVLSRR--DCLELCLGETEFTCRSA 249

  Fly   180 P----------------TGSGGYHAVPYENSKWQEEYWDQE------------------------ 204
            .                |.|.|....||:.:.:.|....:|                        
  Fly   250 NYYRHSGLCELSDMDRITLSAGGSVEPYDGADYLENNCAEEPSKLCEFKRISGKILKTVDSVYQD 314

  Fly   205 ---------------YAGHQHQHNGT-----RVQH-----------------------------I 220
                           |..|.:.:|.|     |:.|                             :
  Fly   315 INTIDECRDLCLNSPYRCHSYDYNDTGDMVCRLSHHSRATLTDVMDPYLDVPEAATYELSACYNV 379

  Fly   221 EAECQDDYMKIRIGFNGSFSGLLYSAGYAYDPDCMYINGSGRDYYEFYIQLNRCGTLGKNSLQEE 285
            ..||:...|..:|..:..|.|.:|:.|   .|....:|.:....::|        .:|.|.|:..
  Fly   380 SIECRSGEMITKIRTSKLFDGKVYAKG---APKSCAVNVNNSLEFDF--------RMGYNDLECN 433

  Fly   286 SRKNPTNFMWNTVTVQYNPLIEEEYDEHFKVTCEYGYDFWKTVTFPFLDV----EVATGNPVVFT 346
            .|::......|.:.:|::.:|....|....|:|:  ||.........:|:    |:.:......|
  Fly   434 VRQSAYGRYMNDIVIQHHDMIVTSSDLGLAVSCQ--YDLTNKTVLNDVDLGVTGEIESSLSEEIT 496

  Fly   347 LSPPECYMEIQNGYGIGGPRVTGPVRVGDPLTLIIYMRSKYDGFDIVVNDCYAHNGANK-RIQLI 410
            :..|...|:|.:..|....|:   ..|||||.|...:......::|.|.:..|.:|::. .|.||
  Fly   497 IDSPNVIMKITSRDGSDMKRM---AEVGDPLALRFEIVEPNSPYEIFVRELVAMDGSDSAEITLI 558

  Fly   411 DQHGCPVDDKLISRFRGSWSDSGVYETQVYAYMKTFRFTGSPALYIECDVRMCHGRCPSQPCHWR 475
            |.:|||.|..::...:....:..|..:|..|    |:|..|..:.....|..|..||....|...
  Fly   559 DANGCPTDQYIMGTIQKLAQNRKVLLSQFDA----FKFPSSEVVQFRALVTPCIPRCEPVICDSE 619

  Fly   476 N-----LKAVT-----KRDTSNMTATNISIPPLSADGEGL---TTESPTANSLSENVNLFQSLRV 527
            :     ||::.     ||...|.|           ||...   |........:.:|:.|.||:::
  Fly   620 DGASGELKSLVSYGRKKRSVLNGT-----------DGAEFLISTRHRRDVGPVDDNILLMQSIQI 673

  Fly   528 LQE-GETDGDDVYAHRQTKPLSPHQ-----------TCLKTSTFSALTAGCSAVLCVLTVTLFIA 580
            ..: |....|....|....  .||:           |||  :.:..:.||  |:..:..:::|..
  Fly   674 TDKFGFQPEDGTTTHGNDS--GPHEKAYAGVAQDKLTCL--NGYGLIMAG--ALFLLAQLSIFGI 732

  Fly   581 CSRLKRR--KESSLY 593
            ...::||  ||..||
  Fly   733 WKTVQRRTSKERYLY 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15020NP_647901.1 ZP 223..473 CDD:214579 59/254 (23%)
nyoNP_651871.2 PAN_1 121..198 CDD:459635 10/76 (13%)
PAN_AP_HGF 208..286 CDD:238532 16/79 (20%)
PAN_1 295..358 CDD:459635 6/62 (10%)
ZP 382..618 CDD:214579 60/255 (24%)

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