Protein Alignment Syx17 and VAM3

DIOPT Version :10

• Sequence 1: NP_001261414.1
• Gene: Syx17 / 38541
• FlyBaseID: FBgn0035540
• Length: 346
• Species: Drosophila melanogaster
• Sequence 2: NP_014749.1
• Gene: VAM3 / 854273
• SGDID: S000005632
• Length: 283
• Species: Saccharomyces cerevisiae
• Alignment Length: 214
• Identity: 47/214 - (21%)
• Similarity: 85/214 - (39%)
• Gaps: 50/214 - (23%)

  Fly    50 IKKE--ELNAMRVIKQIK-----NLLLEMDALREKVREEDLERFDDLMKPGRDTA-FAGMK-EFA 105
            ::||  ::.:.|..|:::     .|:....::|:|:....|     :.:.|:.:| |..:| ::.
Yeast    44 LEKECTKIGSKRDSKELRYKIETELIPNCTSVRDKIESNIL-----IHQNGKLSADFKNLKTKYQ 103

  Fly   106 ELQ-----------LKSPTSTLSSQYDDDLD------NQPQEVDMNSLPAHRHMP--------QL 145
            .||           ||:|.|..:|:...|:.      .|..|....|:..:...|        ||
Yeast   104 SLQQSYNQRKSLFPLKTPISPGTSKERKDIHPRTEAVRQDPESSYISIKVNEQSPLLHNEGQHQL 168

  Fly   146 QLNFQLEEHQLAQRQACLDQMENLQQE-----------IYDLHGMFQGMRQLTAEQSVAVEKIAD 199
            ||..:.|:.|....|..||....:.||           :.:::.:|..:..|..||...|..|.:
Yeast   169 QLQEEQEQQQQGLSQEELDFQTIIHQERSQQIGRIHTAVQEVNAIFHQLGSLVKEQGEQVTTIDE 233

  Fly   200 NAEEALENVQQGELNLRRA 218
            |.....:|:|.....|.||
Yeast   234 NISHLHDNMQNANKQLTRA 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syx17	NP_001261414.1	SNARE_syntaxin17	156..217	CDD:277199	15/71 (21%)
VAM3	NP_014749.1	COG5325	1..267	CDD:227635	47/214 (22%)