DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx17 and Stx17

DIOPT Version :9

Sequence 1:NP_001261414.1 Gene:Syx17 / 38541 FlyBaseID:FBgn0035540 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_080619.2 Gene:Stx17 / 67727 MGIID:1914977 Length:301 Species:Mus musculus


Alignment Length:306 Identity:96/306 - (31%)
Similarity:156/306 - (50%) Gaps:27/306 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DEKLPLKQAEVSIQRFQDVAVPHHLSLLKNHRSNIEKSLALGDWQKIKKEELNAMRVIKQIKNLL 68
            :||:.|::.|.:||:|..:.:|..|..|:.|:.||||......|.|:.:|.:||.|.::|:::.:
Mouse     5 EEKVKLRRLEPAIQKFTKIVIPTDLERLRKHQINIEKYQRCRIWDKLHEEHINAGRTVQQLRSNI 69

  Fly    69 LEMDALREKVREEDLERFDDLMKPGRDTAFAGMKEFAELQLKS---------------PTSTLSS 118
            .||:.|..||.::||.....::.|.::.|.....||.:|.|:|               |:.|.|:
Mouse    70 REMEKLCLKVHKDDLVLLKRMIDPVKEAAATATAEFLQLHLESVEELKKQVNDEELLQPSLTRST 134

  Fly   119 QYDDDLDNQPQEVDMNSLPAHRHMPQLQLNFQLEEHQLAQRQACLDQMENLQQEIYDLHGMFQGM 183
            ..|..|.....|....||.....:|           ::.|.|...:..|.|:.::.:|..:...|
Mouse   135 TVDGVLHTGEAEAASQSLTQIYALP-----------EIPQDQNAAESWETLEADLIELSHLVTDM 188

  Fly   184 RQLTAEQSVAVEKIADNAEEALENVQQGELNLRRALTYKKAMYPVVGALLGTCVGGPIGLVAGMK 248
            ..|.:.|...::.|||:...|..||::|..||::|..||.|..||.|||:|..|||||||:||.|
Mouse   189 SLLVSSQQEKIDSIADHVNSAAVNVEEGTKNLQKAAKYKLAALPVAGALIGGVVGGPIGLLAGFK 253

  Fly   249 AGGL-AAVGCGILGFTGGSVLKANPNVMHGNIEEEQVEPDSESTER 293
            ..|: ||:|.|:||||||.:::.....|...:.....:..|:|.::
Mouse   254 VAGIAAALGGGVLGFTGGKLIQRRKQKMMEKLTSSCPDLPSQSDKK 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx17NP_001261414.1 SNARE_syntaxin17 156..217 CDD:277199 17/60 (28%)
Stx17NP_080619.2 SNARE_syntaxin17 161..222 CDD:277199 17/60 (28%)
Necessary and sufficient for localization to autophagosome. /evidence=ECO:0000250|UniProtKB:P56962 228..274 28/45 (62%)
Endoplasmic reticulum retention signal. /evidence=ECO:0000255 298..301 0/2 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836258
Domainoid 1 1.000 157 1.000 Domainoid score I4145
eggNOG 1 0.900 - - E1_COG5325
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9917
Inparanoid 1 1.050 158 1.000 Inparanoid score I4253
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49838
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008362
OrthoInspector 1 1.000 - - oto92702
orthoMCL 1 0.900 - - OOG6_108277
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5748
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.690

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