DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syx17 and Syx7

DIOPT Version :10

Sequence 1:NP_001261414.1 Gene:Syx17 / 38541 FlyBaseID:FBgn0035540 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_730632.1 Gene:Syx7 / 36173 FlyBaseID:FBgn0267849 Length:282 Species:Drosophila melanogaster


Alignment Length:265 Identity:60/265 - (22%)
Similarity:103/265 - (38%) Gaps:62/265 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AEVSIQRFQDVAVPHHLSLLKNHRSNIEKSL----ALGDWQKIKKEELNAMRVIKQI----KNLL 68
            :|:..||...: :...:..::.:.|.:::.:    ...|..::||:....|....|:    .|.:
  Fly    19 SEIDFQRLAQI-IATSIQKVQQNVSTMQRMVNQLNTPQDSPELKKQLHQIMTYTNQLVTDTNNQI 82

  Fly    69 LEMDALREKVREEDLERFDDLMKPGRDTAFAGMKEFAELQLKS---------------------P 112
            .|:|..:|  |...::| |.|:    |...|.:..|..:|.|:                     |
  Fly    83 NEVDKCKE--RHLKIQR-DRLV----DEFTAALTAFQSVQRKTADIEKTALRQARGDSYNIARPP 140

  Fly   113 TSTLSSQYDDDLDNQPQEVDMNSLPA----HRHMPQLQLNFQLEEHQLAQRQACLDQMENLQQEI 173
            .|:.:...:.....|    |.||...    :|...|.|:..|:||      ||.|..:|..:|.|
  Fly   141 GSSRTGSSNSSASQQ----DNNSFFEDNFFNRKSNQQQMQTQMEE------QADLQALEEQEQVI 195

  Fly   174 YDLHGMFQGMRQ-------LTAEQSVAVEKIADNAEEALENVQQGELNLRRALTY----KKAMYP 227
            .:|.....|:.:       |..||.:.|:.|....|:....|.||..|||:|.:|    :|....
  Fly   196 RELENNIVGVNEIYKKLGALVYEQGLTVDSIESQVEQTSIFVSQGTENLRKASSYRNKVRKKKLI 260

  Fly   228 VVGAL 232
            :||.|
  Fly   261 LVGIL 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx17NP_001261414.1 SNARE_syntaxin17 156..217 CDD:277199 19/67 (28%)
Syx7NP_730632.1 Syntaxin_2 30..123 CDD:464199 19/99 (19%)
COG5325 <97..276 CDD:227635 46/184 (25%)
SNARE 188..247 CDD:473982 17/58 (29%)

Return to query results.
Submit another query.