Protein Alignment Syx17 and syx-3

DIOPT Version :10

• Sequence 1: NP_001261414.1
• Gene: Syx17 / 38541
• FlyBaseID: FBgn0035540
• Length: 346
• Species: Drosophila melanogaster
• Sequence 2: NP_001359828.1
• Gene: syx-3 / 3565871
• WormBaseID: WBGene00006371
• Length: 306
• Species: Caenorhabditis elegans
• Alignment Length: 258
• Identity: 45/258 - (17%)
• Similarity: 104/258 - (40%)
• Gaps: 62/258 - (24%)

  Fly    15 SIQRFQDVAVPHHLSLLKNHRSNIEKSLALGDWQKI---KKEEL-NAMRVI-------------- 61
            |::...|..|..|.:||....::.|.|..|....::   |.|:: |:::::
 Worm    60 SLEEDYDAVVQLHGALLSTPGADSENSNKLKSHNQMFFSKAEQIKNSLKILSEETSRIPTTACGI 124

  Fly    62 ------------KQIKNLLLEMDALREKVREEDLERFDDLMKPGRDTAFAGMKEFAELQLKSPTS 114
                        |..:|::|..:..:::.:|:...:..|.:|            ...:||.
 Worm   125 MRAKSDQVKSIYKTFENIMLNFNREQDEYKEKAKRKIVDYLK------------IRNMQLS---- 173

  Fly   115 TLSSQYDDDLDNQPQEVDMNSLPAHRHMPQLQLNFQLEEHQLAQRQACLDQMENLQQEIYDLHGM 179
                  |::::|   .|...:|........|.||.:...:...:.:|  |:::||::::.:|..|
 Worm   174 ------DEEIEN---AVSSGNLSEVTKGVMLALNEKKALYDEVKSRA--DELKNLERQMGELAQM 227

  Fly   180 FQGMRQLTAEQSVAVEKIADNAEEALENVQQGELNLRRALTYKK-----AMYPVVGALLGTCV 237
            |..:..:...|:..|:.|.::.|.|.|..:|...|:..|...:|     .:..::|:::...:
 Worm   228 FHDLHIMVVSQAKMVDSIVNSVENATEYAKQARGNVEEARNLQKRARKMKVCIIIGSIIAVLI 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syx17	NP_001261414.1	SNARE_syntaxin17	156..217	CDD:277199	15/60 (25%)
syx-3	NP_001359828.1	SynN	44..193	CDD:238105	24/157 (15%)
		SNARE	204..266	CDD:473982	15/63 (24%)