DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx17 and Syx5

DIOPT Version :9

Sequence 1:NP_001261414.1 Gene:Syx17 / 38541 FlyBaseID:FBgn0035540 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_523582.4 Gene:Syx5 / 34966 FlyBaseID:FBgn0011708 Length:467 Species:Drosophila melanogaster


Alignment Length:267 Identity:63/267 - (23%)
Similarity:107/267 - (40%) Gaps:67/267 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EKLPLKQAEVSI-----QRFQDVAVPHHLSLLKNHRSNIEKSLA-LGDWQKIKKEELNAMRVIKQ 63
            |||.:...:.|:     |..|::..     ::|...:.:.:.:| |.|..|.::...|...::..
  Fly   219 EKLTMLAKKKSLFDDRPQEIQELTY-----IIKGDLNALNQQIARLQDISKDQRRHTNGKHLVSH 278

  Fly    64 IKNLLLEMDALREK-------------VREEDLERFDDLMKPGRDTAFAGMKEFAELQLKSPT-- 113
            ..|::|   ||:.|             ||.|:|::    .|..||....|....|...:...|  
  Fly   279 SSNMVL---ALQSKLASMSTDFKQILEVRTENLKQ----QKTRRDQFSQGPGPLAAHTVSPSTAK 336

  Fly   114 --STLSSQYDDDLDNQPQEVDMNSLPAHRHMPQLQLNFQL----EEHQLAQRQACLDQMENLQQE 172
              |.|.|:     :||...:||.|...   .|.|....|:    :.....|::|  :.|:|::..
  Fly   337 QGSLLLSE-----ENQAVSIDMGSSDT---TPLLSTQTQMAIYDDSDNYVQQRA--ETMQNIEST 391

  Fly   173 IYDLHGMFQGMRQLTAEQSVAVEKIADNAEEALENVQQGELNLRRA----LTYKKA-------MY 226
            |.:|.|:||.:..:..||...||:|..|..:|       |||:..|    |.|.::       |.
  Fly   392 IVELGGIFQQLAHMVKEQEEIVERIDTNVADA-------ELNIEAAHGEILKYFQSVSKNRWLMI 449

  Fly   227 PVVGALL 233
            .:.|.|:
  Fly   450 KIFGVLI 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx17NP_001261414.1 SNARE_syntaxin17 156..217 CDD:277199 19/60 (32%)
Syx5NP_523582.4 SNARE_syntaxin5 379..451 CDD:277197 23/80 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467325
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19957
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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