DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx17 and Syx4

DIOPT Version :9

Sequence 1:NP_001261414.1 Gene:Syx17 / 38541 FlyBaseID:FBgn0035540 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_525057.2 Gene:Syx4 / 31269 FlyBaseID:FBgn0024980 Length:333 Species:Drosophila melanogaster


Alignment Length:242 Identity:49/242 - (20%)
Similarity:100/242 - (41%) Gaps:57/242 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SLLKNHRSNIEKSLALGDWQKIKKE------ELNAMRVIKQIKNLLL----EMDALREK---VRE 80
            |.:..:.||::.  .|..:.:|:::      .|..|..:.|..||..    |||.|..|   :..
  Fly    75 SKMTQYGSNVDD--ILNPYTEIRQQLAQIAANLETMNRMAQTVNLRTFNENEMDELHNKNLRLGN 137

  Fly    81 EDLERFDDLMK--PGRD----------TAFAGMKE-FAEL-----------------QLKSPTST 115
            :.:.||:|...  |..:          |.|.|:.: |..|                 .|:..|..
  Fly   138 QLMTRFNDFKANLPAENDYSLEARMKRTLFYGLHQTFINLWHKNELFLQNYETKVKKNLRLHTKI 202

  Fly   116 LSSQYDDDLDNQPQEVDMNSLPAHRHMPQLQLNF----QLEEHQLAQRQACLDQMENLQQEIYDL 176
            ::|:..:      ||:::  |..::.......||    :.|...|.:.....:::..|::.|.::
  Fly   203 INSEASE------QEIEL--LIENKTTKLFVDNFLQETEKERQTLREMMDRFNELRRLEKSIEEV 259

  Fly   177 HGMFQGMRQLTAEQSVAVEKIADNAEEALENVQQGELNLRRALTYKK 223
            |.:|..::.|..|||..::::..:|::|..:|.:|...|.:|..::|
  Fly   260 HALFMRIQTLVMEQSEVIQRVEFHAQQATLHVDKGADELDQAEQHQK 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx17NP_001261414.1 SNARE_syntaxin17 156..217 CDD:277199 14/60 (23%)
Syx4NP_525057.2 Syntaxin 93..273 CDD:279182 35/187 (19%)
SNARE_syntaxin1-like 238..298 CDD:277201 13/59 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447432
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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