DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx17 and syx-7

DIOPT Version :9

Sequence 1:NP_001261414.1 Gene:Syx17 / 38541 FlyBaseID:FBgn0035540 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_492422.2 Gene:syx-7 / 172718 WormBaseID:WBGene00009478 Length:248 Species:Caenorhabditis elegans


Alignment Length:232 Identity:51/232 - (21%)
Similarity:100/232 - (43%) Gaps:44/232 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QAEVSIQRFQDVAVPHHLSLLKNHRSNIEKSLALGDWQK--IKKEELNAMRVIKQ----IKNLLL 69
            |.:::||......:.     |::..:|:..|...|..::  ..::..||..:.|:    :|.|::
 Worm    14 QLQLNIQNLNQQVIQ-----LESFITNLSDSSESGQRERELFNRKAHNAQELSKETNALLKRLVV 73

  Fly    70 ------EMDALREKVREE---DLERFDDLMKPGRDTAFAGMKEFAELQLKSPTSTLSSQYDDDLD 125
                  .:..:||:::.|   .|.|.....:....|..|||              ::::.|....
 Worm    74 MSNSDKNLRGVRERLQNEYIGVLNRLQASQRKAAQTEKAGM--------------VAAEMDAQAA 124

  Fly   126 NQPQEVDM--NSLPAHRHMPQLQLNFQLEEH--QLAQRQACLDQMENLQQEIYDLHGMFQGMRQL 186
            ....|.||  |:   .|...|:|:..|.:.:  .:.:||..|.|:|   ::|.|::.:|..:..:
 Worm   125 RDAAEYDMYGNN---GRSGGQMQMTAQQQGNLQDMKERQNALQQLE---RDIGDVNAIFAELANI 183

  Fly   187 TAEQSVAVEKIADNAEEALENVQQGELNLRRALTYKK 223
            ..||...|:.|..|.|.|...|:||..|:::|:.|.:
 Worm   184 VHEQGDMVDSIEANVEHAQIYVEQGAQNVQQAVYYNQ 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx17NP_001261414.1 SNARE_syntaxin17 156..217 CDD:277199 19/60 (32%)
syx-7NP_492422.2 SynN 3..111 CDD:214699 18/101 (18%)
SNARE_syntaxin7_like 156..215 CDD:277200 19/61 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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