DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx17 and tsnare1

DIOPT Version :10

Sequence 1:NP_001261414.1 Gene:Syx17 / 38541 FlyBaseID:FBgn0035540 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_068070303.1 Gene:tsnare1 / 101882035 ZFINID:ZDB-GENE-100922-189 Length:302 Species:Danio rerio


Alignment Length:292 Identity:54/292 - (18%)
Similarity:104/292 - (35%) Gaps:80/292 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TRDEKLPLKQAEVSIQRFQD----------------VAVPHHLSLLKNHRSNIEKSLAL-GDWQK 49
            ||....|: ..:||....||                |.:..:|..|...|...|...:| ...|:
Zfish    21 TRQGYQPV-ATQVSPSELQDVFQETSSNIFQINANVVTLEKNLQSLGTSRDTAELRQSLHSTQQQ 84

  Fly    50 IKKEELNAMRVIKQIKNLL--------LEMDALREKVREEDLERFDDLMKPGRDTAFA----GMK 102
            ..|...:..:::||:.:::        |.:..|:.:: .:.::|:.:|.|...|.:.|    ..|
Zfish    85 TNKVITSTSQLVKQLTDIISGSSRQDRLRLTRLKTEL-SDSVQRYGELQKKIADRSRALLPPAQK 148

  Fly   103 E--------FAELQLKSPTSTLSSQYDDDLDNQPQEVDMNSLPAHRHMPQLQLNFQLEEHQLAQR 159
            :        |:||..:.|........:.|:.....|:....:..                 |.||
Zfish   149 DRKQSVQTPFSELVEEGPLFGAGESTEGDVQAFLSEISEEDVEI-----------------LRQR 196

  Fly   160 QACLDQMENLQQEIYDLHGMFQGMRQLTAEQSVAVEKIADNAEEALENVQ--------------Q 210
            :..|.|:|   :::.|::.:.:.:..:..||...::.|.|..:....:|:              .
Zfish   197 EEALLQIE---RDMLDVNQIMKDLASMVHEQGDTIDSIEDYIQTTSSHVETANQELAKASHYQDT 258

  Fly   211 GEL-------NLRRALTYKKAMYPVVGALLGT 235
            |:|       |.||.|..:|....:.|.||.|
Zfish   259 GQLTLLEASSNQRRQLRRRKCFLLIGGLLLLT 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx17NP_001261414.1 SNARE_syntaxin17 156..217 CDD:277199 15/81 (19%)
tsnare1XP_068070303.1 Syntaxin_2 44..141 CDD:464199 16/97 (16%)
SNARE_syntaxin7_like 193..252 CDD:277200 12/61 (20%)

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