DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slow and egfl7

DIOPT Version :10

Sequence 1:NP_647898.3 Gene:slow / 38540 FlyBaseID:FBgn0035539 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001072909.1 Gene:egfl7 / 780371 XenbaseID:XB-GENE-491413 Length:279 Species:Xenopus tropicalis


Alignment Length:268 Identity:76/268 - (28%)
Similarity:123/268 - (45%) Gaps:43/268 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 RHICM---QQRTVTMPVKRTEVYSRPTWKHVATPCQPPTFSGQK-CTRVQVVHEQAYRDVIDHKT 305
            |.||.   ...||::    |:.:.:|....:.|.|     .|.: |:..:..::.:||.| ..||
 Frog    29 RRICSAAGHAGTVSV----TQSFVQPVHSPIVTLC-----DGHRICSTYRTTYKVSYRQV-SRKT 83

  Fly   306 AQQMTYDCCTGWSRENPRSDSCMKPICSARCQNGGNCTAPSTCSCPTGFTGRFCEQDVDECQT-E 369
            :..: |.||.||.:....:.||.:..|...|:|||.|.|.:.|.|..|:.|.:|:.|||||.. .
 Frog    84 SLPL-YSCCPGWRKIEAHTHSCGQAGCRLPCRNGGTCVASNKCECSAGWRGIYCQTDVDECSDGS 147

  Fly   370 KPCDQQCINTHGSYFCRCRQGFVLQSDQQSC-----KKVSTNADDAFEARDLENDIDDTDAEVAT 429
            ..|.|.|:|:.|||.|.|..|:.|.:|.:||     ..|...:..:...:.|.:.:.:..||:..
 Frog   148 HQCAQLCVNSAGSYHCGCLGGYRLMADGKSCDLVPKPTVPPASPPSVHEQGLPHSVREEMAELRN 212

  Fly   430 RLQKIEKSL-----ANERVHTNE----------LQKSLQATYSVVDTLKSRLSTLEKQAQDVSRL 479
            :::.:|:.|     ..:.:.|..          |..||| ....:|:|..::|.||:      ||
 Frog   213 KIEVLEQKLHLLLTPFQSLTTTSPDARADPIALLTHSLQ-QLDRIDSLSEQISFLEE------RL 270

  Fly   480 QTNLYKTE 487
            :|...|||
 Frog   271 ETCSCKTE 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slowNP_647898.3 EMI 245..319 CDD:462204 21/77 (27%)
EGF_CA <336..360 CDD:238011 10/23 (43%)
EGF_CA 362..401 CDD:214542 19/44 (43%)
egfl7NP_001072909.1 EMI 40..96 CDD:462204 18/66 (27%)
FXa_inhibition 143..178 CDD:464251 13/34 (38%)
ZIP_TSC22D-like 199..>224 CDD:424092 5/24 (21%)

Return to query results.
Submit another query.