DRSC/TRiP Functional Genomics Resources

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Protein Alignment slow and fbn2b

DIOPT Version :10

Sequence 1:NP_647898.3 Gene:slow / 38540 FlyBaseID:FBgn0035539 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001129262.1 Gene:fbn2b / 571786 ZFINID:ZDB-GENE-090112-3 Length:2868 Species:Danio rerio


Alignment Length:378 Identity:81/378 - (21%)
Similarity:108/378 - (28%) Gaps:149/378 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 RGRGYSFVPSVTVTTAPPPNLNRRSASPGSRSSIGTIPPLVPARRGYSYTTTTSSPPVNTITTDN 224
            :|:|...:.:...|..|...:.:|....|..|..|   |.|...|.:||    ..|...|:...|
Zfish    20 QGQGDGDIQASRFTGKPEGEVQQRVRRRGQESLRG---PNVCGSRFHSY----CCPGWKTLPGGN 77

  Fly   225 ----PFETNTIGRGYPTDPKEMERRHICMQQRTVTMPVKRTEVYSRPTW-----KHVATPCQPPT 280
                |...|:.|.|:            |                |||..     .|:|..|....
Zfish    78 QCIVPICRNSCGDGF------------C----------------SRPNMCTCSSGHLAPSCGAAA 114

  Fly   281 FS--GQKCTRVQVVHEQAYRDVIDHKTAQQMTYDCCTGWSRENPRSDSCMKPICSARCQNGGNCT 343
            ..  ..:|....:.:|.|              ..|..|::     ...|.:|:|.:.|||||.|.
Zfish   115 VQSCSVRCMNGGMCNEDA--------------CSCQKGYT-----GTHCGQPVCESGCQNGGRCI 160

  Fly   344 APSTCSCPTGFTGRFCE------------------------------------------------ 360
            .|:.|:|..||||..||                                                
Zfish   161 GPNRCACVYGFTGPQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPA 225

  Fly   361 ------------------QDVDECQTEKP--CDQQCINTHGSYFCRCRQGFVLQSDQQSCKKVS- 404
                              |||||||....  ....||||.|||.|:|..|.......|.|:.:. 
Zfish   226 QPHPCRRGFIPNIRTGACQDVDECQAVPGLCAGGNCINTVGSYECKCPAGHRQSETNQKCEDIDE 290

  Fly   405 -------------TNADDAFEARDLENDIDDTDAE--VATRLQKIEKSLANER 442
                         ||...::........|..||..  |..|:.....||||.|
Zfish   291 CATISGVCDGGECTNTAGSYVCTCPRGYITSTDGSRCVDHRIGTCFSSLANGR 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slowNP_647898.3 EMI 245..319 CDD:462204 12/80 (15%)
EGF_CA <336..360 CDD:238011 13/23 (57%)
EGF_CA 362..401 CDD:214542 17/40 (43%)
fbn2bNP_001129262.1 Fibrillin_U_N 45..81 CDD:436338 11/42 (26%)
TB 193..>226 CDD:459903 0/32 (0%)
EGF_CA 287..328 CDD:214542 5/40 (13%)
TB 342..386 CDD:459903 1/2 (50%)
EGF_CA 495..525 CDD:214542
EGF_CA 535..576 CDD:214542
EGF_CA 577..617 CDD:214542
EGF_CA 618..658 CDD:214542
TB 673..716 CDD:459903
EGF_CA 728..769 CDD:214542
EGF_CA 770..802 CDD:214542
TB 865..>897 CDD:459903
EGF_CA 915..956 CDD:214542
TB 970..1012 CDD:459903
EGF_CA 1075..1109 CDD:214542
EGF_CA 1118..1150 CDD:214542
FXa_inhibition 1206..1241 CDD:464251
EGF_3 1331..1366 CDD:463759
EGF_3 1372..1407 CDD:463759
EGF_CA 1492..1523 CDD:214542
TB 1553..1593 CDD:459903
EGF_CA 1610..1642 CDD:214542
TB 1706..1750 CDD:459903
EGF_CA 1768..1800 CDD:214542
EGF_CA 1810..>1842 CDD:214542
vWFA <1850..1889 CDD:469594
EGF_CA 1894..1928 CDD:214542
EGF_CA 1976..2008 CDD:214542
EGF_CA 2016..2056 CDD:214542
TB 2071..2116 CDD:459903
EGF_CA 2173..2212 CDD:214542
EGF_CA 2298..2334 CDD:214542
TB 2354..2397 CDD:459903
EGF_CA 2409..2450 CDD:214542
vWFA <2441..2489 CDD:469594
vWFA <2487..2523 CDD:469594
EGF_CA 2574..>2603 CDD:214542
Blue background indicates that the domain is not in the aligned region.

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