DRSC/TRiP Functional Genomics Resources

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Protein Alignment slow and megf6a

DIOPT Version :10

Sequence 1:NP_647898.3 Gene:slow / 38540 FlyBaseID:FBgn0035539 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_068075149.2 Gene:megf6a / 565108 ZFINID:ZDB-GENE-090312-12 Length:1526 Species:Danio rerio


Alignment Length:173 Identity:45/173 - (26%)
Similarity:62/173 - (35%) Gaps:59/173 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 QKCTRVQVVHEQAYRDVIDHKTAQQMTYDCCTGWSRENPRSDSCMKPI---------CSARCQN- 338
            ::.|...:.::|.||.  |.|    |.|.||.|||:.|.:. .|:..|         |..||.| 
Zfish    72 ERRTTYYIGYKQVYRQ--DFK----MAYKCCPGWSQNNSKM-GCLYHIDECQVHNGGCQHRCVNT 129

  Fly   339 -----------------GGNCTAPSTCSCPTGFTGRFCEQ------------------DVDECQT 368
                             |..|.|..:||...|.....|.|                  |...|:.
Zfish   130 RGSYYCECNPGFRLHVDGRTCIAVLSCSVNNGGCEHECVQLSPVHFQCRCRRGYQLTADGKRCRL 194

  Fly   369 EKPCDQQ-------CINTHGSYFCRCRQGFVLQSDQQSCKKVS 404
            ..||.::       |.:..|...|.|.|||:|..||:||:.|:
Zfish   195 RNPCVEKNGGCVHLCRSDGGRVVCSCHQGFMLAVDQKSCEDVN 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slowNP_647898.3 EMI 245..319 CDD:462204 12/34 (35%)
EGF_CA <336..360 CDD:238011 8/41 (20%)
EGF_CA 362..401 CDD:214542 15/45 (33%)
megf6aXP_068075149.2 None

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