DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slow and slow

DIOPT Version :10

Sequence 1:NP_647898.3 Gene:slow / 38540 FlyBaseID:FBgn0035539 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_061497523.1 Gene:slow / 1276358 VectorBaseID:AGAMI1_012274 Length:395 Species:Anopheles gambiae


Alignment Length:480 Identity:150/480 - (31%)
Similarity:200/480 - (41%) Gaps:123/480 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLCCTILLLGT-----VQNAGSN-STSPHPH-QNQTHRGHGHSHRTRHQGNYLATHQRQQRRLQ 68
            |:|..|:|||..     .|.|..: ....|.| :||.|..|.|.||.|      .....:.|...
Mosquito     9 LVLVGTLLLLAVESFSRAQAAADDYPAQQHQHLRNQQHHQHQHHHRHR------TAEPSRSRNQT 67

  Fly    69 SLNQAKSDVELL--PGVTMHEVTRLRRVQPHNPYNKVQTRRLHQSRNPTEWDYNTYNIMTNTFGP 131
            |||.|     |:  ||...:..:..|     .||....|      .....|..:..|        
Mosquito    68 SLNYA-----LISGPGSVGNGGSDYR-----PPYQYPGT------TGQQHWGNHHGN-------- 108

  Fly   132 PPPPMPLSPRYGKGEDNTQDVEFIGVRERGRGYSFVPSVTVTTAPPPNLN-RRSASPGSRSSIGT 195
                   .|::...|...|.      |...||.:. ||.:..::||.... ||::..|.      
Mosquito   109 -------QPQHHHRETPPQH------RRHHRGQAH-PSHSQPSSPPGAAGWRRTSGNGG------ 153

  Fly   196 IPPLVPARRGYSYTTTTSSPPVNTITTDNPFETNTIGRGYPTDPKEMERRHICMQQRTVTMPVKR 260
                |||.|           ||..:.|    .:.|:|          ..||   ...|....|..
Mosquito   154 ----VPAAR-----------PVTRMLT----RSGTVG----------SARH---NNSTSGKNVCT 186

  Fly   261 TEVYSRPTWK-HVATPCQPP-------TFSGQKCTRVQVVHEQAYRDVIDHKTAQQMTYDCCTGW 317
            ..||.:...| :...||:.|       |:|....|          |:|            ||.||
Mosquito   187 VHVYRKSVIKTYQGAPCRDPANCYGLRTYSAPVAT----------REV------------CCRGW 229

  Fly   318 SRENPRSDSCMKPICSARCQNGGNCTAPSTCSCPTGFTGRFCEQDVDECQTEKPCDQQCINTHGS 382
            ......:|.|.||||...|:|||.||||..|:||.||||::||.||:||:..|||||.|.||.||
Mosquito   230 ETTTTVADGCFKPICQTPCRNGGRCTAPDRCTCPAGFTGKYCELDVNECKEHKPCDQTCYNTEGS 294

  Fly   383 YFCRCRQGFVLQSDQQSCKKVSTNADDAFEARDLENDIDDTDAEVATRLQKIEKSLANERVHTNE 447
            |:|.||.||:||||:|:|||:....|.|.||||:|||:|.....:..||:|:|:.:|. |....|
Mosquito   295 YYCTCRDGFMLQSDRQTCKKIDETNDLATEARDMENDLDVDYDSLDIRLRKLEQLMAT-RDDRQE 358

  Fly   448 LQKSLQATYSVVDTLKSRLSTLEKQ 472
            |.|.:|.|...|..|||:::.|.::
Mosquito   359 LTKKVQYTMDAVSVLKSQVARLNQR 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slowNP_647898.3 EMI 245..319 CDD:462204 19/81 (23%)
EGF_CA <336..360 CDD:238011 15/23 (65%)
EGF_CA 362..401 CDD:214542 25/38 (66%)
slowXP_061497523.1 None

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