DRSC/TRiP Functional Genomics Resources

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Protein Alignment slow and vwde

DIOPT Version :10

Sequence 1:NP_647898.3 Gene:slow / 38540 FlyBaseID:FBgn0035539 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_002939057.3 Gene:vwde / 100495432 XenbaseID:XB-GENE-1217528 Length:1802 Species:Xenopus tropicalis


Alignment Length:303 Identity:80/303 - (26%)
Similarity:111/303 - (36%) Gaps:81/303 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 NTFGPPPPPMPLSPRYGKGEDNTQDVEFIGVRERGRGYSFVPSVTVTTAPPPNLN-----RRSAS 186
            ::|..|.|.:     |.:..|:.   .|...|      |...|:|.:||....::     ||:.|
 Frog  1339 SSFAVPSPTV-----YSRQTDSR---SFQTTR------SLSSSLTTSTARRTTISKLLNGRRTTS 1389

  Fly   187 PGSRSSIGTIPPLVPARRGYSYTTTTSSPPVNTITTDNPFETNTIGRGYPTDPKEME---RRH-- 246
            ..|||::.....:.|:.||.|   |...|...|:|  |..:.:::..|.|...|..|   .:|  
 Frog  1390 NLSRSALFASHAIKPSSRGNS---TNIYPTAPTVT--NSSKHHSVTSGSPAKNKTDEWPFTKHTD 1449

  Fly   247 -----ICMQQRTVTM-PVKRTEVYSRPTWKHVATPCQP-----PTFSGQ-KCTRVQVVHEQAYRD 299
                 :....:.||| ..|||...|         ||.|     ||.||. ||.|....:   |.|
 Frog  1450 NYLPTLNGTDQAVTMASAKRTCADS---------PCYPGVICEPTISGGFKCGRCPFGY---YGD 1502

  Fly   300 ------VIDHKTAQQM------TYDCCTGWSRENPRSDSCMKPICSARCQNGGNCTAPSTCSCPT 352
                  :..|...:.|      ...|..|:|..|     |...:|...|:|.|.|..|:.|.|..
 Frog  1503 GVTCKAICRHPCGKNMVCAAPNVCRCRNGYSGYN-----CQTAVCRPDCKNRGKCVRPNVCVCAP 1562

  Fly   353 GFTGRFCEQDVDECQTEKPCDQQCIN---THGSYFCRCRQGFV 392
            |:.|..||        |..|||.|.|   ......|.|..|:|
 Frog  1563 GYGGETCE--------EAYCDQPCENGGTCQARNVCTCPFGYV 1597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slowNP_647898.3 EMI 245..319 CDD:462204 24/99 (24%)
EGF_CA <336..360 CDD:238011 9/23 (39%)
EGF_CA 362..401 CDD:214542 10/34 (29%)
vwdeXP_002939057.3 VWD 434..586 CDD:214566
EGF_CA 1223..1258 CDD:238011
EGF_CA 1260..1299 CDD:214542
Blue background indicates that the domain is not in the aligned region.

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