DRSC/TRiP Functional Genomics Resources

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Protein Alignment slow and adgre2

DIOPT Version :10

Sequence 1:NP_647898.3 Gene:slow / 38540 FlyBaseID:FBgn0035539 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_002941921.2 Gene:adgre2 / 100485797 XenbaseID:XB-GENE-6046733 Length:803 Species:Xenopus tropicalis


Alignment Length:378 Identity:79/378 - (20%)
Similarity:124/378 - (32%) Gaps:100/378 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 PPPPPM-------PLSPRYGKGEDNTQDVEFIGVRERGRG---YSFVPSVTVTTAPPPNLNRRSA 185
            ||.|.:       ||:......:.|:      ||.::|.|   :..|.:..:.||.|..:.....
 Frog    52 PPTPGLGFNRGAQPLTATEHGNQPNS------GVAQQGTGDLPHGTVGNPALKTAKPLGVQTSGG 110

  Fly   186 SPGSRSSIGTIPPLVPARRGYSYTTTTSSPPVNTITTDNPFETNTIG-------RGYPTDPKEME 243
            ...|.||..::..:...        ....||....:..    |||:|       ||:...|...|
 Frog   111 KADSSSSPNSVADVDEC--------AGPEPPCGLYSNC----TNTVGSYLCRCLRGFLRGPNGCE 163

  Fly   244 RRHICMQQRTVTMPVKRTEVYSRPTWKHVATPCQPP---TFSGQKCTRVQ--VVHEQAYRDVIDH 303
            ....|.......:.........|.|....|..|.|.   ...|::|..:.  ...|:..|::.:.
 Frog   164 DVDECQLAEATGLQACPPHSSCRNTLGSFACSCDPGFVFGLDGKRCVDIDECAFEEKCRRELGNL 228

  Fly   304 KTAQQMTYDC-CTGWSRENPRS----DSCMK--PICSAR--CQNGGNCTAPSTCSCPTGF--TGR 357
            ....:.:|.| |....||..::    |.|.:  .:||..  |:|.   .....|.|..||  .|.
 Frog   229 CVNTEGSYRCRCQAGFRETGQACVDIDECAENPSLCSGLGVCENS---LGSYVCGCQPGFRGNGT 290

  Fly   358 FCEQ----------------------------------------DVDECQTEK-PCDQQCINTHG 381
            :||.                                        |:|||.... .|...|:|..|
 Frog   291 YCEDENECASGGHGCDSNAHCGNIIGSYFCQCYQGFNGDGHSCFDIDECSVNNGDCPHSCVNQAG 355

  Fly   382 SYFCRCRQGFVLQSDQQSCKKVSTNADDAFEAR-DLENDIDDTDAEVATRLQK 433
            ||.|:||.|::||.|.::|    |:.|:...|. :.....::||.......:|
 Frog   356 SYRCQCRPGYLLQEDAKNC----TDIDECETANGECAQICENTDGSYGCSCRK 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slowNP_647898.3 EMI 245..319 CDD:462204 13/79 (16%)
EGF_CA <336..360 CDD:238011 7/25 (28%)
EGF_CA 362..401 CDD:214542 17/39 (44%)
adgre2XP_002941921.2 EGF_CA 123..160 CDD:214542 8/48 (17%)
EGF_CA 164..210 CDD:214542 7/45 (16%)
EGF_CA 211..252 CDD:214542 7/40 (18%)
EGF_CA 253..293 CDD:214542 11/42 (26%)
EGF_3 298..333 CDD:463759 0/34 (0%)
FXa_inhibition 339..374 CDD:464251 14/34 (41%)
vWFA <374..413 CDD:469594 7/35 (20%)
FXa_inhibition 421..456 CDD:464251
FXa_inhibition 462..498 CDD:464251
vWFA <495..539 CDD:469594
Blue background indicates that the domain is not in the aligned region.

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