DRSC/TRiP Functional Genomics Resources

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Protein Alignment slow and cd248b

DIOPT Version :10

Sequence 1:NP_647898.3 Gene:slow / 38540 FlyBaseID:FBgn0035539 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_021324763.1 Gene:cd248b / 100002565 ZFINID:ZDB-GENE-050309-46 Length:668 Species:Danio rerio


Alignment Length:103 Identity:36/103 - (34%)
Similarity:50/103 - (48%) Gaps:10/103 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 DSCMKPICSARCQNGGNCTAPSTCSCPTGFT-----GRFCEQDVDECQTEKPCDQQCINTHGSYF 384
            |.||:..|...|:   |.....||.|..||:     ...|| |:|||:|.:.|||.|.|..|.:.
Zfish   380 DECMEGKCDHICE---NLNGSYTCLCHEGFSPLREDPDLCE-DIDECKTPEICDQVCRNYEGGFE 440

  Fly   385 CRCRQGFVLQSDQQSCKKVSTNADDAFEARDLE-NDID 421
            |.|.:|::||.|...|:.|..:.....::.|.. ||.|
Zfish   441 CLCDEGYILQEDNYYCRPVEEDEHLTIQSADATMNDPD 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slowNP_647898.3 EMI 245..319 CDD:462204
EGF_CA <336..360 CDD:238011 7/28 (25%)
EGF_CA 362..401 CDD:214542 17/38 (45%)
cd248bXP_021324763.1 CLECT 41..186 CDD:470576
FXa_inhibition 264..299 CDD:464251
cEGF 322..343 CDD:463661
vWFA <338..372 CDD:469594
vWFA <369..406 CDD:469594 9/28 (32%)
EGF_CA 418..>447 CDD:214542 13/28 (46%)
Blue background indicates that the domain is not in the aligned region.

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