DRSC/TRiP Functional Genomics Resources

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Protein Alignment DopEcR and Gpr21

DIOPT Version :9

Sequence 1:NP_001014559.1 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001103024.1 Gene:Gpr21 / 689917 RGDID:1586383 Length:349 Species:Rattus norvegicus


Alignment Length:338 Identity:82/338 - (24%)
Similarity:143/338 - (42%) Gaps:64/338 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LTKAVLISILGVAIVLSNLLII-----ATYANFKGPTEVINYYLLSLAIADLLCG---------L 66
            |.:.:::..|.|.|:..|:::|     |...|...    .:|::.::|.||||.|         |
  Rat    29 LLEVLIVVFLTVLIISGNIIVIFVFHCAPLLNHHS----TSYFIQTMAYADLLVGVSCLVPSLSL 89

  Fly    67 LVVPFSVYPALTGEWMYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTR 131
            |..|..:..|:|         |:..|::...|.::|:.:...||:|||:|:.|||.|.|:.|..|
  Rat    90 LYYPLPMEEAMT---------CQVFGFIVSVLKSISMASLACISIDRYIAITKPLTYNTLVTPWR 145

  Fly   132 CQCWMVFTWISAALLCCPPILGYSMP-IENNMTHICMLDWGNMAAYSATLAILVLGPSLISIVHN 195
            .:..:...|:.:.|:..|....:..| ...::...|...|...:.::..:.:.:..|:.:.:...
  Rat   146 LRLCIFLIWLYSTLVFLPSFFHWGKPGYHGDVFRWCAESWHTNSYFTLFIVMTLYAPAALIVCFT 210

  Fly   196 YGYIF---------VMMRKIR-------SGE--PIHDKEYATALAENLSNPSHMMSFALVFAFWV 242
            |..||         :..|:.|       :||  ...||.||            |:.|.:...|:|
  Rat   211 YFNIFRICQQHTKEISERQARFSSQNGETGEAQTCPDKRYA------------MVLFRITSVFYV 263

  Fly   243 SWLPWILLRLYEVVTGDVIQSTLINFAVVWIGILNSFWKILIMTSMSPQFRIALRVFCLTICCKT 307
            .|||:|:..|.|..||  ..|.|.:|...|:.|.|||...:|.:..:..|:..|:....::|...
  Rat   264 LWLPYIIYFLLESSTG--CSSRLASFLTTWLAISNSFCNCIIYSLSNSVFQQGLKGLSESVCTSC 326

  Fly   308 KGRLQAELIGLDP 320
            .....|:    ||
  Rat   327 ASHTTAK----DP 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_001014559.1 7tm_classA_rhodopsin-like 18..289 CDD:410626 75/303 (25%)
TM helix 1 18..42 CDD:410626 6/28 (21%)
TM helix 2 51..73 CDD:410626 10/30 (33%)
TM helix 3 89..111 CDD:410626 4/21 (19%)
TM helix 4 134..150 CDD:410626 2/15 (13%)
TM helix 5 174..197 CDD:410626 1/22 (5%)
TM helix 6 230..252 CDD:410626 8/21 (38%)
TM helix 7 264..289 CDD:410626 8/24 (33%)
Gpr21NP_001103024.1 7tm_classA_rhodopsin-like 31..308 CDD:410626 75/303 (25%)
TM helix 1 31..55 CDD:410626 5/23 (22%)
TM helix 2 65..87 CDD:410626 7/21 (33%)
TM helix 3 103..125 CDD:410626 4/21 (19%)
TM helix 4 148..164 CDD:410626 2/15 (13%)
TM helix 5 189..212 CDD:410626 1/22 (5%)
TM helix 6 251..273 CDD:410626 9/33 (27%)
TM helix 7 283..308 CDD:410626 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BK8J
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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