DRSC/TRiP Functional Genomics Resources

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Protein Alignment DopEcR and Gpr52

DIOPT Version :10

Sequence 1:NP_647897.2 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001276864.1 Gene:Gpr52 / 684623 RGDID:1587949 Length:361 Species:Rattus norvegicus


Alignment Length:300 Identity:81/300 - (27%)
Similarity:143/300 - (47%) Gaps:19/300 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KAVLISILGVAIVLSNLLIIATYANFKGPT---EVINYYLLSLAIADLLCGL--LVVPFSVYPAL 77
            :.|:|.:|...|:..||.:|..:  ...|.   ...:|::.::|.||||.|:  ||...|:....
  Rat    43 ETVVIVLLTFLIISGNLTVIFVF--HCAPLLHHYTTSYFIQTMAYADLLVGVTCLVPTLSLLHYS 105

  Fly    78 TGEWMYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRCQCWMVFTWIS 142
            ||  ::..:.|:..||:...|.:||:.....||||||||:.|||.|..:.|..|.:..::..||.
  Rat   106 TG--VHESLTCQVFGYIISVLKSVSMACLACISVDRYLAITKPLSYNQLVTPCRLRICIIMIWIY 168

  Fly   143 AALLCCPPILGYSMP-IENNMTHICMLDWGNMAAYSATLAILVLGPSLISIVHNYGYIFVMMRK- 205
            :.|:..|...|:..| ...::...|...|...|.::..:..|:..|:.:.:...|.:||.:.|: 
  Rat   169 SCLIFLPSFFGWGKPGYHGDIFEWCATSWLTSAYFTCFIVCLLYAPAALVVCFTYFHIFKICRQH 233

  Fly   206 ------IRSGEPIHDKEYATALAENLSNPSHMMSFALVFAFWVSWLPWILLRLYEVVTGDVIQST 264
                  .|:..|.|:.:.:.....:......|:.|.:...|::.|||:|:..|.|  :..|:.:.
  Rat   234 TKEINDRRARFPSHEVDASREAGHSPDRRYAMVLFRITSVFYMLWLPYIIYFLLE--SSRVLDNP 296

  Fly   265 LINFAVVWIGILNSFWKILIMTSMSPQFRIALRVFCLTIC 304
            .::|...|:.|.|||...:|.:..:..||:.||....|:|
  Rat   297 TLSFLTTWLAISNSFCNCVIYSLSNSVFRLGLRRLSQTMC 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_647897.2 7tm_classA_rhodopsin-like 18..289 CDD:410626 75/283 (27%)
TM helix 1 18..43 CDD:410626 7/24 (29%)
TM helix 2 50..76 CDD:410626 10/27 (37%)
TM helix 3 88..118 CDD:410626 14/29 (48%)
TM helix 4 131..150 CDD:410626 4/18 (22%)
TM helix 5 173..198 CDD:410626 4/24 (17%)
TM helix 6 224..254 CDD:410626 8/29 (28%)
TM helix 7 264..289 CDD:410626 7/24 (29%)
Gpr52NP_001276864.1 7tm_classA_rhodopsin-like 43..321 CDD:410626 75/283 (27%)
TM helix 1 43..68 CDD:410626 7/26 (27%)
TM helix 2 76..102 CDD:410626 10/25 (40%)
TM helix 3 114..144 CDD:410626 14/29 (48%)
TM helix 4 157..176 CDD:410626 4/18 (22%)
TM helix 5 200..225 CDD:410626 4/24 (17%)
TM helix 6 258..288 CDD:410626 8/29 (28%)
TM helix 7 296..321 CDD:410626 7/24 (29%)

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