DRSC/TRiP Functional Genomics Resources

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Protein Alignment DopEcR and zgc:162592

DIOPT Version :9

Sequence 1:NP_001014559.1 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001076297.1 Gene:zgc:162592 / 561993 ZFINID:ZDB-GENE-030131-5400 Length:375 Species:Danio rerio


Alignment Length:315 Identity:85/315 - (26%)
Similarity:144/315 - (45%) Gaps:42/315 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KAVLISILGVAIVLSNLLIIATYAN-FKGPTEVINYYLLSLAIADLLCGLLVVPFSVYPALTGEW 81
            |..:||:|||.|.|.|:.::...|: ..|.:....|:||||..||....||::|.::..:|..|:
Zfish    30 KIGIISVLGVMITLGNIAVVMVIASAVSGWSRNSRYFLLSLTGADSAFALLIMPLNLCVSLIKEY 94

  Fly    82 MYG-DIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRCQCWMVFTWISAAL 145
            ..| |..|....:...|:::..:||...||::||:||..||:|..:.|:.|....:.|:|:    
Zfish    95 NAGPDPFCHIVAFFNATIYSTCMYTLATISLERYIAVFYPLKYSVLLTRRRALLLISFSWV---- 155

  Fly   146 LCCPPILGY--SMP---IENNMTH---ICMLDWGNMAAYSATLAILVLGP-SLISIVHNYGYIFV 201
              .||:|.:  |.|   ||.:.:.   :|...:.:..:||.||...:..| |.|....|. .::|
Zfish   156 --FPPVLLFPISFPAGIIEVHFSRASLVCNPLYSSNVSYSLTLTCFIFFPCSAIMTFCNL-RLWV 217

  Fly   202 MMRKIRSGEPIHD--KEYATALAENLSNPSHMMSFALVFAFWVSWLPWILLRLYEVVTGDVIQST 264
            ..::.||....|.  ..|...:|..:..|       ::..::..|.|.:::.||..::|..:.. 
Zfish   218 AAKRQRSKLRRHSWGGGYRPKVALRVLVP-------VMTVYYTCWTPCMVIMLYNAISGSAVPE- 274

  Fly   265 LINFAVVWI----GILNSFWKILIMTSMSPQFRIALRVFCLTI----------CC 305
            .|.|..||:    |.||..:...|..|...:|.:.|:..||.:          ||
Zfish   275 WIEFIAVWLPTSNGFLNCIFYFWINHSFRKKFHVVLQKLCLKLGLCPSSDTDSCC 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_001014559.1 7tm_classA_rhodopsin-like 18..289 CDD:410626 79/287 (28%)
TM helix 1 18..42 CDD:410626 9/23 (39%)
TM helix 2 51..73 CDD:410626 10/21 (48%)
TM helix 3 89..111 CDD:410626 4/21 (19%)
TM helix 4 134..150 CDD:410626 2/15 (13%)
TM helix 5 174..197 CDD:410626 8/23 (35%)
TM helix 6 230..252 CDD:410626 2/21 (10%)
TM helix 7 264..289 CDD:410626 9/28 (32%)
zgc:162592NP_001076297.1 7tm_1 44..295 CDD:278431 69/265 (26%)
7tm_4 <103..>213 CDD:304433 31/115 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585304
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1099557at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17081
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.980

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