DRSC/TRiP Functional Genomics Resources

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Protein Alignment DopEcR and adra1bb

DIOPT Version :9

Sequence 1:NP_001014559.1 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001007359.1 Gene:adra1bb / 492486 ZFINID:ZDB-GENE-041114-51 Length:481 Species:Danio rerio


Alignment Length:348 Identity:85/348 - (24%)
Similarity:151/348 - (43%) Gaps:74/348 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LTKAVLIS-ILGVAI---VLSNLLIIATYA---NFKGPTEVINYYLLSLAIADLLCGLLVVPFSV 73
            |::||.:. :||..|   :..|:|:|.:..   :.:.||   ||::::|||||||.|..|:|.|.
Zfish    44 LSRAVPLGLVLGFFITFAIAGNILVILSVVCNRHLRSPT---NYFIVNLAIADLLLGTTVLPVSA 105

  Fly    74 YPALTGEWMYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRCQCWMVF 138
            ...:.|.|::|.|.|.....::|.....|:.:...||:|||:.|..||:|..:.|..|....|:.
Zfish   106 TLEVVGHWVFGRIFCDVWAAVDVLCCTASIMSLCVISIDRYIGVSHPLQYPNIVTGRRALLAMLG 170

  Fly   139 TWISAALLCCPPILGYSMPIENNMTHICMLDWGNMAAYSATLAILVLGPSLISIVHNYGYIFVMM 203
            .|:.:.::...|:||:..|...:.| :|.::.....|..::|....:  .||.|:..|..::|:.
Zfish   171 VWVLSLVISIGPLLGWKEPPSPDDT-VCAINEEPFYALFSSLGSFYI--PLIVILVMYCRVYVVA 232

  Fly   204 R----------------------KIRSGEPIHD---KEYATALAENLSNPSHMMSFA-------- 235
            :                      :|..|..:|:   |..|.....:|:  ..::.|:        
Zfish   233 KRTTKNLEAGVKTESMNSGEITLRIHRGSQVHEDAGKSRAHQARNSLT--VKLLKFSREKKAAKT 295

  Fly   236 ---LVFAFWVSWLPWIL----------LRLYEVVTGDVIQSTLINFAVVWIGILNSFWKILIMTS 287
               :|..|.:.|||:.|          ||..|.|:.          .:.|:|..||....:|...
Zfish   296 LGVVVGMFTLCWLPFFLTLPIVSFNTSLRPPETVSS----------IIFWLGYFNSCLNPIIYPC 350

  Fly   288 MSPQFRIALRVFCLTICCKTKGR 310
            .|.:|::|   |...:.|:.:.|
Zfish   351 YSREFKLA---FIRILKCRCRRR 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_001014559.1 7tm_classA_rhodopsin-like 18..289 CDD:410626 78/323 (24%)
TM helix 1 18..42 CDD:410626 8/30 (27%)
TM helix 2 51..73 CDD:410626 12/21 (57%)
TM helix 3 89..111 CDD:410626 3/21 (14%)
TM helix 4 134..150 CDD:410626 2/15 (13%)
TM helix 5 174..197 CDD:410626 5/22 (23%)
TM helix 6 230..252 CDD:410626 8/42 (19%)
TM helix 7 264..289 CDD:410626 5/24 (21%)
adra1bbNP_001007359.1 7tm_4 61..>228 CDD:304433 50/172 (29%)
7tm_1 64..348 CDD:278431 72/301 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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