DRSC/TRiP Functional Genomics Resources

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Protein Alignment DopEcR and Octbeta2R

DIOPT Version :9

Sequence 1:NP_001014559.1 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster


Alignment Length:338 Identity:88/338 - (26%)
Similarity:143/338 - (42%) Gaps:58/338 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KAVLISILGVAIVLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCGLLVVPFSVYPALTGEWM 82
            ||.::.::.:|.:..|||:|.:....:....:.||:::|||:||::..::.:.|:....:||.|.
  Fly   156 KAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWN 220

  Fly    83 YGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRCQCWMVFTWISAALLC 147
            :...:|.....|:|.....|:.....||||||.|:.|||:|....||......::.||||.|||.
  Fly   221 FSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLS 285

  Fly   148 CPPI-LG-YSMP-----IENNMTHICMLDWGNMAAYSATLAILVLGPSLISIVHNYGYIF----- 200
            ..|| :| |:.|     :..|.|....:.....|..|::::..:  |..| ::..|..||     
  Fly   286 FLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWI--PCTI-MIFTYLAIFREANR 347

  Fly   201 ----VMMRKIR-----------SGEPIHDKEYATAL----AENLSNPS---HMMSF--------- 234
                :|||...           |||.:.....:..|    .|....|:   |::..         
  Fly   348 QEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHKAART 412

  Fly   235 --ALVFAFWVSWLPWIL-----LRLYEVVTGDVIQSTLINFAVVWIGILNSFWKILIMTSMSPQF 292
              .::..|.:.|||:.|     :...|....|::.|.|.     |||..||....||....:..|
  Fly   413 LGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILF-----WIGYFNSTLNPLIYAYFNRDF 472

  Fly   293 RIALRVFCLTICC 305
            |.|.|...|.:.|
  Fly   473 REAFRNTLLCLFC 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_001014559.1 7tm_classA_rhodopsin-like 18..289 CDD:410626 82/320 (26%)
TM helix 1 18..42 CDD:410626 7/23 (30%)
TM helix 2 51..73 CDD:410626 8/21 (38%)
TM helix 3 89..111 CDD:410626 4/21 (19%)
TM helix 4 134..150 CDD:410626 7/15 (47%)
TM helix 5 174..197 CDD:410626 4/22 (18%)
TM helix 6 230..252 CDD:410626 6/37 (16%)
TM helix 7 264..289 CDD:410626 8/24 (33%)
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 52/180 (29%)
7tm_1 170..465 CDD:278431 78/302 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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