DRSC/TRiP Functional Genomics Resources

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Protein Alignment DopEcR and mAChR-B

DIOPT Version :10

Sequence 1:NP_647897.2 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster


Alignment Length:147 Identity:49/147 - (33%)
Similarity:82/147 - (55%) Gaps:10/147 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALTKAVLISI-LGVAIVLS---NLLIIATY---ANFKGPTEVINYYLLSLAIADLLCGLLVVPFS 72
            ||.:.:||:| |.:.|:|:   |:|::..:   .|.:.|:   ||::.|||..|:|.|.:.:||.
  Fly   129 ALWQTILIAICLAICIILTVGGNILVLLAFIVDRNIRQPS---NYFIASLAATDMLIGTVSMPFY 190

  Fly    73 VYPALTGEWMYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRCQCWMV 137
            ....|.|.|..|.::|.....::.|:..||.||.:.|::|||.:|:...:|.:.:|:||....:.
  Fly   191 TIYVLKGYWDLGPMLCDLWLSVDYTVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTRTRVIYMVT 255

  Fly   138 FTWISAALLCCPPILGY 154
            .|||..|||....|.|:
  Fly   256 ITWIIPALLFFISIFGW 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_647897.2 7tm_classA_rhodopsin-like 18..289 CDD:410626 47/144 (33%)
TM helix 1 18..43 CDD:410626 8/31 (26%)
TM helix 2 50..76 CDD:410626 10/25 (40%)
TM helix 3 88..118 CDD:410626 10/29 (34%)
TM helix 4 131..150 CDD:410626 7/18 (39%)
TM helix 5 173..198 CDD:410626
TM helix 6 224..254 CDD:410626
TM helix 7 264..289 CDD:410626
mAChR-BNP_649764.1 7tmA_mAChR_GAR-2-like 147..>323 CDD:320429 41/129 (32%)
TM helix 2 168..194 CDD:320429 10/28 (36%)
TM helix 3 206..236 CDD:320429 10/29 (34%)
TM helix 4 248..271 CDD:320429 9/22 (41%)
TM helix 5 293..322 CDD:320429
7tm_GPCRs <932..1008 CDD:475119
TM helix 6 941..963 CDD:410628
TM helix 7 976..1001 CDD:410628
Blue background indicates that the domain is not in the aligned region.

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