DRSC/TRiP Functional Genomics Resources

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Protein Alignment DopEcR and Adra1d

DIOPT Version :9

Sequence 1:NP_001014559.1 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_077809.2 Gene:Adra1d / 29413 RGDID:62064 Length:562 Species:Rattus norvegicus


Alignment Length:348 Identity:82/348 - (23%)
Similarity:145/348 - (41%) Gaps:60/348 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALTKAVLISILGVAI-----------VLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCGLLV 68
            |....:::|..||.:           |..|||:|.:.|..:....|.||::::||:||||....|
  Rat    79 AAVGGLVVSAQGVGVGVFLAAFILTAVAGNLLVILSVACNRHLQTVTNYFIVNLAVADLLLSAAV 143

  Fly    69 VPFSVYPALTGEWMYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRCQ 133
            :|||....:.|.|.:|...|.....::|.....|:.:...||||||:.||..|:|..:.|:.:..
  Rat   144 LPFSATMEVLGFWAFGRTFCDVWAAVDVLCCTASILSLCTISVDRYVGVRHSLKYPAIMTERKAA 208

  Fly   134 CWMVFTWISAALLCCPPILGYSMPIENNMTHICMLDWGNMAAYSATLAILVLGPSLISIVHNYGY 198
            ..:...|..|.::...|:||:..|:..:.....:.:....|.:|:..:..:  |..: ||..|..
  Rat   209 AILALLWAVALVVSVGPLLGWKEPVPPDERFCGITEEVGYAIFSSVCSFYL--PMAV-IVVMYCR 270

  Fly   199 IFVM----MRKIRSG---EP---------IHDKEYATA--------------LAENLSNPSHMMS 233
            ::|:    .|.:.:|   ||         ||.:..||:              |..:||  ..::.
  Rat   271 VYVVARSTTRSLEAGIKREPGKASEVVLRIHCRGAATSAKGYPGTQSSKGHTLRSSLS--VRLLK 333

  Fly   234 FA-----------LVFAFWVSWLPWILLRLYEVVTGDVIQSTLINFAVVWIGILNSFWKILIMTS 287
            |:           :|..|.:.|.|:..:.....:...:..|..:...:.|:|..||....||...
  Rat   334 FSREKKAAKTLAIVVGVFVLCWFPFFFVLPLGSLFPQLKPSEGVFKVIFWLGYFNSCVNPLIYPC 398

  Fly   288 MSPQFRIALRVFCLTICCKTKGR 310
            .|.:|:   |.|...:.|:.:.|
  Rat   399 SSREFK---RAFLRLLRCQCRRR 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_001014559.1 7tm_classA_rhodopsin-like 18..289 CDD:410626 75/322 (23%)
TM helix 1 18..42 CDD:410626 8/34 (24%)
TM helix 2 51..73 CDD:410626 11/21 (52%)
TM helix 3 89..111 CDD:410626 3/21 (14%)
TM helix 4 134..150 CDD:410626 2/15 (13%)
TM helix 5 174..197 CDD:410626 5/22 (23%)
TM helix 6 230..252 CDD:410626 5/32 (16%)
TM helix 7 264..289 CDD:410626 6/24 (25%)
Adra1dNP_077809.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 10..71
7tm_GPCRs 91..407 CDD:421689 76/323 (24%)
TM helix 1 92..118 CDD:410628 6/25 (24%)
TM helix 2 125..151 CDD:410628 12/25 (48%)
TM helix 3 163..193 CDD:410628 9/29 (31%)
TM helix 4 205..228 CDD:410628 3/22 (14%)
TM helix 5 245..274 CDD:410628 6/31 (19%)
TM helix 6 335..365 CDD:410628 4/29 (14%)
TM helix 7 375..400 CDD:410628 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 452..481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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