DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DopEcR and DopEcR

DIOPT Version :10

Sequence 1:NP_647897.2 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:XP_061497524.1 Gene:DopEcR / 1276357 VectorBaseID:AGAMI1_004955 Length:334 Species:Anopheles gambiae


Alignment Length:322 Identity:244/322 - (75%)
Similarity:285/322 - (88%) Gaps:0/322 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQEMSYLQDNSKVEALTKAVLISILGVAIVLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCG 65
            |..:|:||..|.:||||:|.:|.||.||||:|||:::|||.|||||.|||||||||||:||||||
Mosquito    13 MHGLSHLQTGSTLEALTQATIILILAVAIVISNLIVVATYLNFKGPHEVINYYLLSLAVADLLCG 77

  Fly    66 LLVVPFSVYPALTGEWMYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKT 130
            |.:|..|||||.:|||:|||:|||..||||||||::||||||||||||||||||||||||:||||
Mosquito    78 LFIVSLSVYPAFSGEWIYGDVVCRMVGYLEVTLWSISVYTFMWISVDRYLAVRKPLRYETIQTKT 142

  Fly   131 RCQCWMVFTWISAALLCCPPILGYSMPIENNMTHICMLDWGNMAAYSATLAILVLGPSLISIVHN 195
            ||||||.|||||||:|||||:|||:....:..|:||||:|||||||||||||||||||:||||:|
Mosquito   143 RCQCWMAFTWISAAMLCCPPLLGYNEANYSKTTNICMLEWGNMAAYSATLAILVLGPSVISIVYN 207

  Fly   196 YGYIFVMMRKIRSGEPIHDKEYATALAENLSNPSHMMSFALVFAFWVSWLPWILLRLYEVVTGDV 260
            |||||.||||:|||.|||||||||||||||:||||.|||||||:||:||.|:|.||:||:|:|:.
Mosquito   208 YGYIFTMMRKVRSGAPIHDKEYATALAENLANPSHCMSFALVFSFWISWAPYIGLRIYELVSGET 272

  Fly   261 IQSTLINFAVVWIGILNSFWKILIMTSMSPQFRIALRVFCLTICCKTKGRLQAELIGLDPDD 322
            |.:.|::|..||||||||||||:||||||.|||:.:|:..||||||||||||||||||||||
Mosquito   273 IDNPLLHFGAVWIGILNSFWKIIIMTSMSQQFRLLVRLLFLTICCKTKGRLQAELIGLDPDD 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_647897.2 7tm_classA_rhodopsin-like 18..289 CDD:410626 207/270 (77%)
TM helix 1 18..43 CDD:410626 14/24 (58%)
TM helix 2 50..76 CDD:410626 20/25 (80%)
TM helix 3 88..118 CDD:410626 25/29 (86%)
TM helix 4 131..150 CDD:410626 16/18 (89%)
TM helix 5 173..198 CDD:410626 22/24 (92%)
TM helix 6 224..254 CDD:410626 21/29 (72%)
TM helix 7 264..289 CDD:410626 18/24 (75%)
DopEcRXP_061497524.1 None

Return to query results.
Submit another query.