DRSC/TRiP Functional Genomics Resources

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Protein Alignment DopEcR and Adra1d

DIOPT Version :9

Sequence 1:NP_001014559.1 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_038488.4 Gene:Adra1d / 11550 MGIID:106673 Length:562 Species:Mus musculus


Alignment Length:346 Identity:82/346 - (23%)
Similarity:143/346 - (41%) Gaps:56/346 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALTKAVLISILGVAI-----------VLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCGLLV 68
            |....:::|..||.:           |..|||:|.:.|..:....|.||::::||:||||....|
Mouse    79 AAVGGLVVSAQGVGVGVFLAAFILTAVAGNLLVILSVACNRHLQTVTNYFIVNLAVADLLLSAAV 143

  Fly    69 VPFSVYPALTGEWMYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRCQ 133
            :|||....:.|.|.:|...|.....::|.....|:.:...||||||:.||..|:|..:.|:.:..
Mouse   144 LPFSATMEVLGFWAFGRTFCDVWAAVDVLCCTASILSLCTISVDRYVGVRHSLKYPAIMTERKAA 208

  Fly   134 CWMVFTWISAALLCCPPILGYSMPIENNMTHICMLDWGNMAAYSATLAILVLGPSLISIVHNYGY 198
            ..:...|..|.::...|:||:..|:..:.....:.:....|.:|:..:..:  |..: ||..|..
Mouse   209 AILALLWAVALVVSVGPLLGWKEPVPPDERFCGITEEVGYAIFSSVCSFYL--PMAV-IVVMYCR 270

  Fly   199 IFVM----MRKIRSG---EP---------IHDKEYATALAEN---LSNPSHMMSFAL-------- 236
            ::|:    .|.:.:|   ||         ||.:..||:...|   .|:..|.:..:|        
Mouse   271 VYVVARSTTRSLEAGIKREPGKASEVVLRIHCRGAATSAKGNPGTQSSKGHTLRSSLSVRLLKFS 335

  Fly   237 ------------VFAFWVSWLPWILLRLYEVVTGDVIQSTLINFAVVWIGILNSFWKILIMTSMS 289
                        |..|.:.|.|:..:.....:...:..|..:...:.|:|..||....||....|
Mouse   336 REKKAAKTLAIVVGVFVLCWFPFFFVLPLGSLFPQLKPSEGVFKVIFWLGYFNSCVNPLIYPCSS 400

  Fly   290 PQFRIALRVFCLTICCKTKGR 310
            .:|:   |.|...:.|:.:.|
Mouse   401 REFK---RAFLRLLRCQCRRR 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_001014559.1 7tm_classA_rhodopsin-like 18..289 CDD:410626 75/320 (23%)
TM helix 1 18..42 CDD:410626 8/34 (24%)
TM helix 2 51..73 CDD:410626 11/21 (52%)
TM helix 3 89..111 CDD:410626 3/21 (14%)
TM helix 4 134..150 CDD:410626 2/15 (13%)
TM helix 5 174..197 CDD:410626 5/22 (23%)
TM helix 6 230..252 CDD:410626 6/41 (15%)
TM helix 7 264..289 CDD:410626 6/24 (25%)
Adra1dNP_038488.4 7tm_GPCRs 91..407 CDD:333717 76/321 (24%)
TM helix 1 93..117 CDD:320095 5/23 (22%)
TM helix 2 126..148 CDD:320095 11/21 (52%)
TM helix 3 164..186 CDD:320095 3/21 (14%)
TM helix 4 209..225 CDD:320095 2/15 (13%)
TM helix 5 246..269 CDD:320095 5/25 (20%)
TM helix 6 338..363 CDD:320095 4/24 (17%)
TM helix 7 375..400 CDD:320095 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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