DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DopEcR and LOC101884949

DIOPT Version :9

Sequence 1:NP_001014559.1 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:XP_005174488.1 Gene:LOC101884949 / 101884949 -ID:- Length:342 Species:Danio rerio


Alignment Length:317 Identity:78/317 - (24%)
Similarity:138/317 - (43%) Gaps:40/317 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LTKAVLISILGVAIVLSNLLIIATYANFKGPT---EVINYYLLSLAIADLLCGL--LVVPFSVYP 75
            |.:..:|..|.|.|:..||::|..:  ...|.   ...:.::.::|.||||.|:  |:...|:..
Zfish    28 LLEVAVILFLTVLIISGNLVVIFVF--HCAPLLSHHTTSSFIQTMAYADLLVGVSCLIPSLSLLH 90

  Fly    76 ALTGEWMYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRCQCWMVFTW 140
            .|.|  :...:.|....|:...|.:||:.:...:|:|||:|:.:||.|..:.|..|.:..::..|
Zfish    91 HLEG--LNERLTCMVFSYMVSVLKSVSMASLACVSIDRYVAITRPLSYTALVTPCRLRTCIILIW 153

  Fly   141 ISAALLCCPPILGYSMPIENNMTHICMLDWGNMAAYSATLAILVLGPSLISIVHNYGYIF----- 200
            :.::|:..|...|:..|..:.........|.....::|.:...:..|:..::...|.:||     
Zfish   154 LYSSLIFLPSFFGWGKPGYHGDVFKWCSSWDTQPIFTAFIVAALYAPAAFTVCFTYAHIFRICRQ 218

  Fly   201 ----VMMRKIRSG----EP----IHDKEYATALAENLSNPSHMMSFALVFAFWVSWLPWILLRLY 253
                :..|:.|.|    ||    ..||.|||.|            |.:...|::.|||:|:..|.
Zfish   219 HTRQISERRARFGPQDPEPGEQACTDKRYATVL------------FRITSVFYILWLPYIIYFLL 271

  Fly   254 EVVTGDVIQSTLINFAVVWIGILNSFWKILIMTSMSPQFRIALRVFCLTICCKTKGR 310
            |  :..:....:.:|...|:.|.|||...||.:..:..||..|:..||....:|..:
Zfish   272 E--SAGIYHHAIASFLTTWLAISNSFCNCLIYSLSNSAFRKGLKRLCLLCLQRTDNK 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_001014559.1 7tm_classA_rhodopsin-like 18..289 CDD:410626 71/292 (24%)
TM helix 1 18..42 CDD:410626 7/23 (30%)
TM helix 2 51..73 CDD:410626 7/23 (30%)
TM helix 3 89..111 CDD:410626 4/21 (19%)
TM helix 4 134..150 CDD:410626 2/15 (13%)
TM helix 5 174..197 CDD:410626 2/22 (9%)
TM helix 6 230..252 CDD:410626 6/21 (29%)
TM helix 7 264..289 CDD:410626 8/24 (33%)
LOC101884949XP_005174488.1 7tm_4 36..>165 CDD:304433 35/132 (27%)
7tm_1 44..301 CDD:278431 66/274 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1099557at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.