DRSC/TRiP Functional Genomics Resources

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Protein Alignment DopEcR and LOC101735091

DIOPT Version :9

Sequence 1:NP_001014559.1 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster
Sequence 2:XP_012824262.2 Gene:LOC101735091 / 101735091 -ID:- Length:310 Species:Xenopus tropicalis


Alignment Length:243 Identity:49/243 - (20%)
Similarity:99/243 - (40%) Gaps:30/243 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LISILGVAIVLSNLLIIATYANFKGPT--EVINYYLLSLAIADLLCGLLVVPFSVYPALTGE--W 81
            |.:::.:..:|.|.:||...  :..|.  ..:.::|.:|:..||....:..|..:...|..|  .
 Frog    30 LFALIYIFTLLGNFVIITVI--YLSPQLHNPMYFFLCNLSFIDLSSASITQPKLLSMLLLRENTI 92

  Fly    82 MYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRC-----QCWMV---- 137
            .||..:.:...::..|  ....::...::.|||:|:.|||||..:...|.|     .||::    
 Frog    93 SYGGCIAQLYSFMLFT--GTEFFSLTAMAYDRYVAICKPLRYHILMNNTICVRITSTCWVLGMVD 155

  Fly   138 ----FTWISAALLCCPPILGYSMPIENNMTHICMLDWGNMAAYSATLAILVLGPSLISIVHNYGY 198
                ...||....|...::.:.....:.:..:..:|...:.:.:....:||..|..:.:|.:|..
 Frog   156 PLPHTVLISQLSFCGSHVINHFFCDMSVVLKLSCVDTSFIESMTYLFGLLVEFPVFLLLVISYCC 220

  Fly   199 IFVMMRKIRSGEPIHDKEYATALAENLSNPSHMMSFALVF-AFWVSWL 245
            |...:.||.|.:. ..|.::|.       .||::...|.: ..|:.:|
 Frog   221 ILCAILKIHSAKD-RSKAFSTC-------SSHLIVVILFYGTVWIMYL 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DopEcRNP_001014559.1 7tm_classA_rhodopsin-like 18..289 CDD:410626 49/243 (20%)
TM helix 1 18..42 CDD:410626 5/20 (25%)
TM helix 2 51..73 CDD:410626 5/21 (24%)
TM helix 3 89..111 CDD:410626 1/21 (5%)
TM helix 4 134..150 CDD:410626 5/23 (22%)
TM helix 5 174..197 CDD:410626 4/22 (18%)
TM helix 6 230..252 CDD:410626 4/17 (24%)
TM helix 7 264..289 CDD:410626
LOC101735091XP_012824262.2 7tmA_OR 25..294 CDD:320092 49/243 (20%)
TM helix 1 27..51 CDD:320092 5/22 (23%)
TM helix 2 60..82 CDD:320092 5/21 (24%)
TM helix 3 98..120 CDD:320092 1/23 (4%)
TM helix 4 143..159 CDD:320092 2/15 (13%)
TM helix 5 196..219 CDD:320092 4/22 (18%)
TM helix 6 238..260 CDD:320092 5/28 (18%)
TM helix 7 269..294 CDD:320092
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1099557at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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