DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11342 and Bcdin3d

DIOPT Version :9

Sequence 1:NP_647896.1 Gene:CG11342 / 38538 FlyBaseID:FBgn0035537 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001102221.1 Gene:Bcdin3d / 363001 RGDID:1306433 Length:285 Species:Rattus norvegicus


Alignment Length:241 Identity:85/241 - (35%)
Similarity:127/241 - (52%) Gaps:12/241 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PGAVQYGNFFNYYQFSSAAERVKLLPDADIWLPALEDGETQKDKPYFILDVGCNCGVLTQLMHKY 72
            |||..:|||.:|.:|....:|::|||..  .|..|...|..:.:|...||||||.|.|:..::|:
  Rat    26 PGAAPFGNFPHYSRFHPPEQRLRLLPPE--LLRQLFPPEGPERRPILGLDVGCNSGDLSMALYKH 88

  Fly    73 L--------EERLHRSVKVLGVDIDPRLIQRASEENESPKDVSYACVDVLDDEAFE-SVKTYMEV 128
            .        .....|.:::|..||||.|::||......|..:::..:|::|.|:.: .:.:::..
  Rat    89 FLSPHDGETSSGTSRELRLLCCDIDPVLVERAENGCRFPDALTFITLDIMDQESRKVPLSSFLSQ 153

  Fly   129 NNLEKFDAICCYSITMWIHLNHHDQGLRFFLQKLSNLAELLVVEPQPWKCYQKAERRLKKAG-EI 192
            .....||.:.|.|:||||||||.|:||..||..:|:|...|:|||||||||:.|.|||:|.| ..
  Rat   154 FGRSVFDIVFCMSVTMWIHLNHGDRGLCEFLAHVSSLCSYLLVEPQPWKCYRAAARRLRKLGLHN 218

  Fly   193 FPLFLELKWRSDVDLQIQKYLEESLDRRKIFKSAPTKWQRKICFYR 238
            |..|..|..|.|:..||.:.|.:............|.|.|.:..:|
  Rat   219 FDHFRSLAIRGDMASQIVRILTQDHGMELACCFGNTSWDRSLLLFR 264

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG11342NP_647896.1 Methyltransf_12 56..165 CDD:285454 40/117 (34%)
AdoMet_MTases 134..238 CDD:302624 46/104 (44%)
Bcdin3dNP_001102221.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 1/1 (100%)
AdoMet_MTases 72..>167 CDD:302624 25/94 (27%)