DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and pacsin1b

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001028900.1 Gene:pacsin1b / 619246 ZFINID:ZDB-GENE-050913-35 Length:445 Species:Danio rerio


Alignment Length:530 Identity:107/530 - (20%)
Similarity:183/530 - (34%) Gaps:161/530 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 KCLSDGATLQQNLTTQLSSLDRAKRNYEKAYRDSEKAVDSYKRADMDLNLSRAEVER-------- 233
            |.:.||..|..::.:.:.  :|||  .||||  |::..|..||       .|..|||        
Zfish    29 KRIEDGHRLCNDMMSCIQ--ERAK--IEKAY--SQQLTDWSKR-------WRQLVERGPQYGTLE 80

  Fly   234 --YKNVMTSKIQQSD---DAKNEYANQ-LQKTNNLQQQHYSMLLPSVLNRLQELDEKRTRGFREF 292
              :..|||...:.|:   :.||...|: |:|..|.|:..|...:.......:|.||    |||  
Zfish    81 RAWLAVMTEAEKVSELHQEVKNNLLNEDLEKVKNWQKDAYHKQMMGGFKETKEADE----GFR-- 139

  Fly   293 IVGAADVESSVAPIIARCMEGIVKAGESINEKEDTFKVIERYQSGFTPPRDIPFEDLSKCDPDSV 357
                            :..:...|..:.:...:.|:.:                    .|..:.:
Zfish   140 ----------------KAQKPWAKKLKELETAKKTYHM--------------------ACKEEKI 168

  Fly   358 QDSHYSNSTSNHLTIRGTMSANKLKKRVGIFNIFGSNKNSLTADGQKEDFSDLPPNQRRKKLQAK 422
            ..:..:||                           ..:.|:|.|.|             ||||.|
Zfish   169 ASAREANS---------------------------KGEASVTTDQQ-------------KKLQEK 193

  Fly   423 IAELTQNI--AQE--TKARDGLMKMKIVYEANSSLGNPMTVEGQLNESEHK----LEKLKVDLKK 479
            :.:...::  |:|  .|:.|.|.|....|..|..:     |..|..:.|.|    |.::.:|.|:
Zfish   194 VDKCKNDVQKAKEKYEKSLDELNKCTPQYMENMEV-----VFDQCQQFEEKRLNFLREVLLDTKR 253

  Fly   480 YQGFLEKASQVPT--------ATSSPQASRNQLQNGHRTSRHSNGSADDHHDDGDDQPDDAGSLS 536
            :....|..|....        .::|.|.......:.|....|.|....:..:     ||.:.::|
Zfish   254 HLNLTESQSYATVYRELERTIVSASAQEDLKWFSSVHGPGMHMNWPQFEEFN-----PDLSHAIS 313

  Fly   537 RSD----SEDNVAQIQNGHNNNNNGSASPESGLGTSHTSLPGSGQGSANENAIGEDTYYETEVET 597
            :.:    :.|.|...|..|...:   .:|::|...|.:|...:.|.||..:   :|....|..::
Zfish   314 KKEKVKRNHDGVTLTQVTHGAEH---GTPQTGDRGSVSSYEKNQQYSAEWS---DDEQPPTAAQS 372

  Fly   598 L------NPVG------KCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRVRRENNSNGWD 650
            .      ||..      :.||||.:|...:..:....|:||..:|.:...||.:.|.::.    .
Zfish   373 ASETNGGNPFEEDSKGVRVRALYDYEGQEQDELTFKAGDELTKLEDEDEQGWCKGRLDSG----Q 433

  Fly   651 EGFVPTSYIE 660
            .|..|.:|:|
Zfish   434 LGLYPANYVE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 38/155 (25%)
HR1_CIP4-like 412..488 CDD:212009 21/83 (25%)
SH3_CIP4-like 603..661 CDD:212844 16/58 (28%)
pacsin1bNP_001028900.1 F-BAR_PACSIN1 18..275 CDD:153364 68/345 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..390 13/68 (19%)
SH3_PACSIN1-2 389..444 CDD:212931 16/59 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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