DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and itsn2a

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_021324162.1 Gene:itsn2a / 566412 ZFINID:ZDB-GENE-041014-84 Length:1666 Species:Danio rerio


Alignment Length:775 Identity:156/775 - (20%)
Similarity:262/775 - (33%) Gaps:252/775 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NNKLAESENSAQNSNNMSWGTELWDQNENLAIHTNRGIDALDKFANFLRDRVAIETE-YAGKLRR 112
            :.:|.|.|...:|.:|:|:..:|   .||.    .||...|:|....|:::...|.| ...:.||
Zfish   325 STELIEPELPQKNKSNVSYEDKL---RENF----QRGNAELEKRRLALQEQQRREEERRREEERR 382

  Fly   113 LVKNYQPKKKEEEDNEFTSVQ--AFRNLLKEVGDLAGQREVVSESLQLQIIAGVTLLSKTLREER 175
            ..:..|.|::||.:......:  ..|...:|...:..|||                |.:...|||
Zfish   383 EEEKRQQKEREERERREREAREMEIRRQREEERRMERQRE----------------LERQREEER 431

  Fly   176 KKCLS--DGATLQQNLTTQLSSLDRAKRNYEKAYRDSEKAVDSYKRADMDLNLSRAEVERYKNVM 238
            .|.|.  :.|..|:....:.|.....:...||...|.::..|..:..:::|   .|...::|.:.
Zfish   432 LKELERREEAERQRRREWEKSKRVELQTQKEKEQNDIQRLKDRKRSLEIEL---EAVGNKHKQIS 493

  Fly   239 TSKIQQSDDAKN---------EYANQ-----LQKTNNLQQQHYSMLLPSVLNRL----QELDEKR 285
            :    |..|||:         |..||     :...|:||.|...|  ...||:|    |.|.::.
Zfish   494 S----QLRDAKSKRQGQWAELELINQRRDVCITDINSLQLQFDEM--QRQLNQLGPEKQRLADRL 552

  Fly   286 ---TRGFREFIVGAADVESSVAPIIARCMEGIVKAGESINEKEDTFKV--IERYQSGFTPPRDIP 345
               |:.....::.  ||:.||......|.:  :|....:.|:|.|.|:  :|:|.      ::|.
Zfish   553 VHFTQNISSPLIN--DVKQSVCEKDRSCRK--LKEQLDVLERETTAKLSQMEQYN------KEIK 607

  Fly   346 FEDLSKCDPDSVQDSHYSNSTSNHLTIRGTMSANKLKKRVG-IFNIFGSNKNSLTADGQKEDF-- 407
            |.::..|                  .::|.:|.      :| :.|:|...|.......|::|.  
Zfish   608 FVEMDDC------------------VLQGLLSL------LGCLTNLFLLIKELRQKQSQQQDVLE 648

  Fly   408 ------SD-LPPNQRRKK-----------------------LQAKIAELTQNIAQETKA------ 436
                  || |...||.:|                       |:.:.||..:.:|||.:|      
Zfish   649 QLRRVRSDKLKELQRHRKEEEERKRKKEEEAARQAQLEQERLEQEEAERQRKLAQEREAKLREEQ 713

  Fly   437 -RDGLMKMKIVYEA----------------------------NSSLGN----------------- 455
             |..|.::....|.                            ||:..|                 
Zfish   714 QRQALARLLEAQEQARAKEEKRRAEEKERNELDVHTQSSLPFNSTENNILQPVVIPEVTCSSLTT 778

  Fly   456 -----PMTVEGQLNESEHKLEK---LKVD----------LKKYQG--------FLEKASQ----V 490
                 |.|..   |..|..||.   ::||          ...|.|        :.|:.|:    .
Zfish   779 YRALYPFTAR---NSDELTLEADCFIQVDESTVRETGWLYGSYSGNRGWFPESYAERCSKDSQTQ 840

  Fly   491 PTA--TSSPQASRN-----QLQNGHRTSRHSNGSADDHHDDGDDQPDDAGSL----SRSDS---- 540
            |||  |.|...|.|     ::.....|..|:..|.:..|       ..|.:|    :::||    
Zfish   841 PTAAETESTAPSANYPGIPRVDIEGPTPTHTPVSTNTQH-------SQAVALCEWSAKTDSHLGF 898

  Fly   541 -EDNVAQIQNGHNNNNNGSASPESG-LGTSHTSLPGSGQGSANENAIGEDTY---YETEVETLNP 600
             :|::..:.....|...|....:.| ...||.|:      ....|...|..|   .|.||.....
Zfish   899 CKDDIITVLEKQENWWYGELKEKRGWFPCSHVSV------VTTNNTQSEPLYSSVEEIEVSDSGL 957

  Fly   601 VGKCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRVRRENNSNGWDEGFVPTSYIE 660
            :.:..|||.:|:...|.:..| .|::.::...:|:.|      ....|...|..|::|::
Zfish   958 LDEYVALYTYESPESGDLTFS-AEDVVLVTEKEGEWW------RGCIGDQTGLFPSNYVK 1010

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 61/275 (22%)
HR1_CIP4-like 412..488 CDD:212009 27/176 (15%)
SH3_CIP4-like 603..661 CDD:212844 13/58 (22%)
itsn2aXP_021324162.1 EH 7..92 CDD:197477
EH 214..293 CDD:197477
SMC_N 453..>727 CDD:330553 63/316 (20%)
SH3_Intersectin2_1 776..832 CDD:212921 10/58 (17%)
SH3 881..932 CDD:327375 10/50 (20%)
SH3_Intersectin_3 960..1011 CDD:212772 13/58 (22%)
SH3_Intersectin2_4 1028..1086 CDD:212927
SH3 1101..1154 CDD:327375
RhoGEF 1181..1364 CDD:238091
PH_13 1383..1523 CDD:318790
C2_Intersectin 1524..1658 CDD:176021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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