DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and srgap3

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_005166172.1 Gene:srgap3 / 561567 ZFINID:ZDB-GENE-060524-4 Length:1094 Species:Danio rerio


Alignment Length:810 Identity:150/810 - (18%)
Similarity:268/810 - (33%) Gaps:230/810 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LAESENSAQNSNNMSWGTELWDQNENLAIHTNRGIDALDKFANFLRDRVAIETEYAGKLRRLVKN 116
            :||.|...:...|     :|.:|.:.|...:...|..|.....|.|.:..|:.||:..|.:|.:.
Zfish    14 IAEYETQVKEIRN-----QLVEQFKCLEQQSEARIQLLQDLQEFFRRKAEIQLEYSRSLEKLAER 73

  Fly   117 YQPKKK--EEEDNEFTSVQAFRNLLKEVGDLAGQREVVSESLQLQIIAGVTLLSKTLREERKKCL 179
            :..|.:  .:|.:..:||..:..:|.:....:.....:::.....:|..:..:|:.:....||..
Zfish    74 FSSKIRGPRKEQHLLSSVNCWYLVLNQTRRESRDHATLNDIYINNVIVRLAQISEDVIRLFKKSK 138

  Fly   180 SDGATLQQNLTTQLSSLDRAKRNY----------EKAYRDSEKAVDSY--KRADMDLNLSRAE-- 230
            ..|..:.:.|....:.|....:.|          |...:|:||..:..  |..|:::||.|.|  
Zfish   139 EIGIQMHEELVKVTNELYTVMKTYHMYHTESISAESKLKDAEKQEEKQFSKSGDLNVNLLRHEDR 203

  Fly   231 ---------VERYKNVMTSKIQQS----DDAKNEYANQLQKTNNLQQQHYSMLLPSVLNRLQELD 282
                     :|:.|....:|..::    ..|:|:|...|..||.:..::|   :..|.:.:...|
Zfish   204 PQRRSSVRKIEKMKEKRQAKYSENKLKCTKARNDYLLNLAATNAVVAKYY---IHDVSDMIDCCD 265

  Fly   283 ----EKRTRGFREFIVGAADVESSVAPIIARCMEG---IVKAGESINEKEDTFKVIERYQSGFTP 340
                ....|..|.::....::|:|       ..||   |..|.::::.:.|..|:::.|...|.|
Zfish   266 LGYHASLARTLRTYLSAEYNLETS-------RHEGLDIIENAVDNLDPRSDKHKIMDMYNQVFCP 323

  Fly   341 PRDIPFEDLSKCDPDSVQDS-------------HYSNSTSNHL---------TIRGTMSANKLKK 383
            |  :.||.|.....:..|.|             |...|....|         |:..||...:...
Zfish   324 P--MRFEFLPHMGDEVCQVSAQQPVQTELLMRFHQLQSRLATLKIENEEVRKTLDATMQTLQDML 386

  Fly   384 RVGIFNIFGSNKNSLTADGQK----EDF-SDLPPNQRRK------------------------KL 419
            .|..|::..:.::|.:.:..|    |.: |.|...:||.                        ||
Zfish   387 TVEDFDVSDAFQHSRSTESIKSVASESYMSKLNIAKRRANQQETEVFYFTKFKEYLNGSNLIIKL 451

  Fly   420 QAKIAELTQNIAQETKARDGLM---------------KMKIVYEANSSLGN------------PM 457
            |||...|.|.:.:..:|..|..               :.:.||......||            |:
Zfish   452 QAKHDLLKQTLGEGERAECGTTRPPTLPPKPQKLRKPRPRSVYNHKLFNGNMESFIKDSGQAIPL 516

  Fly   458 TVEGQL---------------------------------------NESEHKLEKLKVDLKKY--- 480
            .||..:                                       ::|:|.:..:...||.|   
Zfish   517 VVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPLVDDQSDHDINSVAGVLKLYFRG 581

  Fly   481 --------QGFLEKASQVPTATSSPQASRNQ-------------LQNGHRTSRHSNGSADDHHDD 524
                    :.||:..|.|...:|:.:|...|             |:.......|.:..:|::..|
Zfish   582 LENPLFPKERFLDMISTVKLESSAERAHHIQQIIVTLPRTVIIVLRYLFAFLNHLSQYSDENMMD 646

  Fly   525 GDDQPDDAGS--LSRSDSEDNVAQIQNGHNN---------NNNGSASPE-----------SGLGT 567
            ..:.....|.  :...|.:|.||  ...|.|         |.....||.           :| |.
Zfish   647 PYNLAICFGPTLMPIPDGQDPVA--CQAHVNEVIKTIIMHNEIIFPSPRELDGPVYEKCMTG-GE 708

  Fly   568 SHTSLPGSGQGSANE-NAIGEDTYYETEVETLNPVGKCRALYPFEASSEGSIPMSEGEELQVIEI 631
            .:...|.|..|:.:| :...|....:.|||.:..:.|    :.:...:...:...:|..|.:...
Zfish   709 EYCDSPHSEPGTIDEADNCTEPHTSDDEVEQIEAIAK----FDYMGRTPRELSFKKGASLLLYHR 769

  Fly   632 DQGDGWTRVRRENNSNGWDEGFVPTSYIEI 661
            ...|.|     |...||.| |.:|..||.:
Zfish   770 ASEDWW-----EGRHNGVD-GLIPHQYIVV 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 55/285 (19%)
HR1_CIP4-like 412..488 CDD:212009 25/176 (14%)
SH3_CIP4-like 603..661 CDD:212844 13/57 (23%)
srgap3XP_005166172.1 BAR 26..273 CDD:299863 48/254 (19%)
RhoGAP_srGAP 497..684 CDD:239848 28/188 (15%)
SH3_srGAP1-3 741..793 CDD:212888 13/61 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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