DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and srgap1b

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_005164640.1 Gene:srgap1b / 555788 ZFINID:ZDB-GENE-041210-103 Length:1071 Species:Danio rerio


Alignment Length:823 Identity:157/823 - (19%)
Similarity:286/823 - (34%) Gaps:252/823 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SGSSRSSSNNK-LAESENSAQNSNNMSWGTELWDQNENLAIHTNRGIDALDKFANFLRDRVAIET 104
            |.|::|....: :.|.|:..:...     ::|.:|.:.|...|:..:..|....:|.|.:..||:
Zfish     2 SNSTKSKKEKEIITEYESQVKEIR-----SQLVEQQKCLEQQTDMRVQLLQDLQDFFRKKAEIES 61

  Fly   105 EYAGKLRRLVKNYQPKKKEEED--------NEFTSVQAFRNLLKEVGDLAGQREVVSESLQLQII 161
            ||:..|.:|.:.:..|.:..:|        |..:.|..:..||.:|...:.....:|:.....:|
Zfish    62 EYSRNLEKLAERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSDLYLNNVI 126

  Fly   162 AGVT--------LLSKT------LREERKKCLSDGATLQQNL----TTQLSS---LDRAKRNYEK 205
            ...|        ||.|:      |:|:..|.|::..|:.:..    |..||:   |..|:|..|:
Zfish   127 TRFTHVSEDNMRLLKKSKEIIFQLQEDLMKILNELYTVMKTYHMYHTETLSAENKLKEAERQGER 191

  Fly   206 AYRDSEKAVDSYKRADMDLNLSRA-EVERYKNVMTSKIQQSD----DAKNEYANQLQKTNNLQQQ 265
            ..|..| ||.|.:..|.....:.| ::::.|....:|..::.    .|:|||...|:.||....:
Zfish   192 QGRGGE-AVFSLRTEDRHQRRNAARKIQKMKEKRQAKYSENKLKVMKARNEYLLTLEATNASLFK 255

  Fly   266 HYSMLLPSVLNRLQELDE--------KRTRGFREFIVGAADVESSVAPIIAR-----CMEGIVKA 317
            :|       ::.|..|.:        ..:|..|.::.....:|:|      |     .:||.|  
Zfish   256 YY-------IHDLSHLTDCCDLGYHAGLSRALRTYLSAEYSLETS------RHEGLDILEGAV-- 305

  Fly   318 GESINEKEDTFKVIERYQSGFTPPRDIPF-----EDLSKCDP-DSVQ----------DSHYSNST 366
             |.::...|..:.:|.:.:.||||....|     :.:|:... ..||          .|..|...
Zfish   306 -EGLDPGNDRQRFMETHPTSFTPPTRFTFQPHMGDQVSQITALPQVQAELLLRFQQLQSRLSTLK 369

  Fly   367 SNHLTIRGTMSA--NKLKKRVGI--FNIFGSNKNSLTADGQKEDFSDL----PPNQRRK------ 417
            ..:..::.|..|  :.::..|.:  :::..|.::|.:.:..|...||.    |...:|:      
Zfish   370 IENEEVKKTSEATLSTIQDMVNMEDYDVSESFQHSRSTESVKSSVSDTYLSKPSLAKRRANQQET 434

  Fly   418 -------------------KLQAKIAELTQNIAQETKA---------------RDGLMKMKIVYE 448
                               |||||...|.::||:..:|               :|....:.::.|
Zfish   435 ELFYFTKLKEYLEGSNLIAKLQAKHDMLKRSIAEGYRADIMTTSRRRNSHSRNQDSGKAIPLIVE 499

  Fly   449 A-----------------------------NS-SLGN-PMTVEGQLNESEHKLEKLKVDLKKY-- 480
            :                             || ..|| |:|.|    |:.|.:..:...||.|  
Zfish   500 SCIRFINLYGLQHQGIFRVSGSQVEVNDIKNSFERGNDPLTDE----ENNHDINSVAGVLKMYFR 560

  Fly   481 ---------------------QGFLEKASQV-PTATSSPQ----------ASRNQLQNGHRTSRH 513
                                 :...|:|..: ...|:.|:          |..|.|      |::
Zfish   561 NLDNPIFPKEKFNDLIACVRTESLYERALSIRKILTTMPRPTLVLMRYLFAFLNHL------SQY 619

  Fly   514 SNGSADDHHDDGDDQPDDAGSL------SRSDSEDNVAQIQ-NGHNNN-------NNGSASPESG 564
            |           |:...|.|:|      :...:.|.:.|:. ..|.|.       ::.:..|::.
Zfish   620 S-----------DENMMDPGNLAICFGPTLMPTPDLLDQVSCQAHVNEIVKTIIIHHETIFPDTK 673

  Fly   565 -----------LGTSHTSLPGSGQGSANENAIGEDTYYETEVETLNPVGKCRALYPFEASSEGSI 618
                       ..|.:...|.|..|:..|......|..:|..|...|| :..|.:.:...|...:
Zfish   674 ELEGPVYEKCMSNTEYCESPYSEPGAFEEGEQDGGTETQTSEEEGEPV-EAIAKFDYVGRSGREL 737

  Fly   619 PMSEGEELQVIEIDQGDGWTRVRRENNSNGWDEGFVPTSYIEI 661
            ...:|..|.:.:....|.|     |...||.| |.:|..|:.:
Zfish   738 TFKKGSTLLLFQRASEDWW-----EGRHNGTD-GLIPHQYVTL 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 65/296 (22%)
HR1_CIP4-like 412..488 CDD:212009 25/169 (15%)
SH3_CIP4-like 603..661 CDD:212844 13/57 (23%)
srgap1bXP_005164640.1 BAR 26..277 CDD:299863 57/258 (22%)
RhoGAP_srGAP 480..664 CDD:239848 31/204 (15%)
SH3 722..772 CDD:302595 12/55 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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