DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and sh3d19

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_009289295.1 Gene:sh3d19 / 553811 ZFINID:ZDB-GENE-050522-481 Length:963 Species:Danio rerio


Alignment Length:788 Identity:146/788 - (18%)
Similarity:242/788 - (30%) Gaps:285/788 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 AESENSAQNS-NNMSWGTELWDQN--ENLAI-HTNRGI--------------------------- 86
            :|.::...|. ||....|.|.::|  ||:.. |::|.|                           
Zfish   273 SEPQSELSNPVNNQGEQTNLTNENQIENMTFHHSDRNIRSRIQAFESQAATENDAASVPFPRPRK 337

  Fly    87 -------------------------DALDKFANFLRDRVAIETEYAGKLRRLVKNYQPKKKEEED 126
                                     :...:|.:.|.:.:.:|...|.: .:|.|......:||.|
Zfish   338 IGAKPPILAPKPSIAPRPSVIKPKEEPFSQFDSHLYEELDMEPTPAPR-PQLFKKPSLDSREESD 401

  Fly   127 NE---FTSVQAFRNLLKEVGDLAGQREVV---------------------SESLQLQIIAGVTLL 167
            ::   .|::.:..:|:|.....:...|||                     |.:|...:.:.|.:|
Zfish   402 SQPFFKTALTSRPSLVKHKNVYSQDEEVVVKGPIPPLKPSKDLLNANNHNSTALLPDLTSAVNVL 466

  Fly   168 SK-----TLREERKKCLSDGATLQQNLTTQLSSLDR--------AKRNYEKAYRDSEKAVD---- 215
            |.     ::.....|.:..|........||  ::.|        :|.:...|:.|||:||:    
Zfish   467 SNDYVDTSINHSPTKPVRQGGFSYMGGNTQ--AVTRRPTVIRVPSKTDKISAFSDSEEAVEFPPP 529

  Fly   216 ---------------SYKR------ADMDL-------------------NLSRAEVERYKNVMTS 240
                           ::::      :||.:                   ...|....:..|   |
Zfish   530 LPVQKAVGSTPTPAKAFRQDPFNVSSDMSIPPRPSGGKVLPPRPPPAKTGPGRPPPPQTNN---S 591

  Fly   241 KIQQSDDAKNEYANQLQKTNNLQQQH-----YSMLLPSVLNRLQELDEKRT----RGFREFIVGA 296
            :.:.||...::.|...|:.:..|||:     ....||...|....|..|.|    .|..||    
Zfish   592 QRRPSDSGFSQIAPSKQQPSQWQQQNRRASKKGPALPPRPNPGHRLYNKYTLEVPHGIAEF---- 652

  Fly   297 ADVESSVAPIIARCMEGIVKAGESINEKEDTFKVIERYQSGFTPPRDIPFEDLSKCDPDSVQDSH 361
             |...|             ..||...:|.:...::|...|.       .||..:.....:||.||
Zfish   653 -DYNGS-------------NTGELSFQKNEVLVLLEELDSR-------TFECQAGNTKGTVQKSH 696

  Fly   362 YSNSTSNHLTIRGTMSANKLKKRVGIFNIFGSNKNSLTADGQKEDFSDLPPNQRRKKLQAKIAEL 426
            ....|.  ||   .:|:|.|.::...|...|.|..||..:. ..||:...|.:    |..|..::
Zfish   697 MKIITP--LT---DLSSNSLPQKTSSFRGMGGNAGSLQVEA-LYDFTPAGPGE----LALKAGDV 751

  Fly   427 TQNIAQETKARDGLMKMKIVYEANSSLGNPMTVEGQLNESEHKLEKLKVDLKKYQGFLEKAS--- 488
            ..|:.|                                          :|...|.|....|:   
Zfish   752 VSNVEQ------------------------------------------LDDDWYMGTCRNATGFF 774

  Fly   489 --QVPTATSSPQ----ASRNQLQN--GHRTSRHSNGSA--DDHHDDGDDQPDDAGSLSRSDSEDN 543
              ......|.|.    |.||:.:|  ...|.|.....|  |...:.||:         .|..||:
Zfish   775 PINYVKVLSKPNIYAPAFRNEWKNKPSPETVRGPRCVARFDFEGEQGDE---------LSFFEDD 830

  Fly   544 VAQIQ--------NGHNNNNNG-------------SASPESGLGTSHTSLPGSGQGSANENAIGE 587
            |.|::        .|..|.:.|             .:.|......:..:|||....|.      :
Zfish   831 VIQLKEYLGEEWARGEVNGHVGIFPLNFVEVIEDLPSVPVQKSAPNKIALPGMASSST------Q 889

  Fly   588 DTYYETEVETLNPVGKCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRVRRENNSNGWDEG 652
            .:|..:|.|: |......|||.|.|.:|..:|..:|:.:.|......:.|:     ...|| .||
Zfish   890 SSYRASEAES-NGAEWAVALYDFTAETEEDLPFQQGDRILVTAHVDDEWWS-----GRING-REG 947

  Fly   653 FVPTSYIE 660
            |.|.:::|
Zfish   948 FFPKAFVE 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 63/394 (16%)
HR1_CIP4-like 412..488 CDD:212009 8/75 (11%)
SH3_CIP4-like 603..661 CDD:212844 17/58 (29%)
sh3d19XP_009289295.1 SH3 647..696 CDD:302595 14/73 (19%)
SH3 732..782 CDD:302595 11/96 (11%)
SH3_Eve1_3 809..859 CDD:212750 12/58 (21%)
SH3_Eve1_4 904..953 CDD:212751 16/54 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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