DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and pacsin1a

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001315286.1 Gene:pacsin1a / 553559 ZFINID:ZDB-GENE-050522-155 Length:438 Species:Danio rerio


Alignment Length:594 Identity:110/594 - (18%)
Similarity:185/594 - (31%) Gaps:225/594 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 EEEDNEFTSVQAFRNLLKEVGDLAGQREVVSESLQLQIIAGVTLLSKTLREERKKCLSDGATLQQ 187
            :|..:.|..|..::..:|.:.|  |.|                     |..:...||.:.|.:::
Zfish    12 DEAMDSFWEVGNYKRAVKRIDD--GHR---------------------LCNDLMNCLQERAKIEK 53

  Fly   188 NLTTQLSSLDRAKRNYEKAYRDSEKAVDSYKRADMDLNLSRAEVER-YKNVMTSKIQQSD---DA 248
            :.:.||:       .:.|.:|...:....|           ..||| :..:||...:.|:   :.
Zfish    54 SYSAQLT-------EWSKRWRQLIEKGPQY-----------GSVERAWIAMMTEADKVSELHQEV 100

  Fly   249 KNEYANQ-LQKTNNLQQQHYSMLLPSVLNRLQELDEKRTRGFREFIVGAADVESSVAPIIARCME 312
            ||...|: ::|..|.|:..|              ..:...||:|                     
Zfish   101 KNGLMNEDVEKVKNWQKDSY--------------HRQMMGGFKE--------------------- 130

  Fly   313 GIVKAGESINEKEDTFKVIERYQSGFTPPRDIPFEDLSKCDPDSVQDSHYSNSTSNHLTIRGTMS 377
                    ..|.|:.||..::           |:                               
Zfish   131 --------TKEAEEGFKKAQK-----------PW------------------------------- 145

  Fly   378 ANKLKKRVGIFNIFG-SNKNSLTADGQKEDFSDLPPNQRRKKLQAKIAELTQNI--AQE--TKAR 437
            |.|||:.......:. :.|....|..::.|.|..|..|  |||..|..:..|::  |:|  .|:.
Zfish   146 AKKLKEMETAKKTYHMACKEEKLAASREADASVTPDQQ--KKLHEKTEKCKQDVQKAKEKYEKSL 208

  Fly   438 DGLMKMKIVYEANSSLGNPMTVEGQLNESEHK----LEKLKVDLKKYQGFLEKASQVPT------ 492
            |.|.|.:..|     :.:...|..|..:.|.|    |:::.:|:|::....|..:....      
Zfish   209 DELSKCRPPY-----MESMEQVFDQCQQHEVKRLTFLKEVLLDIKRHLNLTENQNYAAVYREFER 268

  Fly   493 --ATSSPQASRNQLQNGHRTSRHSNGSADDHHD---------------DG----------DDQPD 530
              ..::.|.......|.|....|.|....:.::               ||          ..||.
Zfish   269 TILAANTQEDLKWFSNNHGPGMHMNWPQFEEYNPEATNAVAKREKKKPDGVAPATPNTEHAGQPG 333

  Fly   531 DAGSLSRSD---------SEDNVAQIQNGHNNNNNGSASPESGLGTSHTSLPGSGQGSANENAIG 586
            |.||:|..|         |:|......:|  |..||.|                       |:..
Zfish   334 DRGSVSSYDKNQTYSTEWSDDEQPAGYSG--NETNGGA-----------------------NSFE 373

  Fly   587 EDTYYETEVETLNPVGKCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRVRRENNSNGWDE 651
            |||.....|       :.||||.::...:..:....|:||..||.:...||.|.|.::..:    
Zfish   374 EDTASRGGV-------RVRALYDYDGQEQDELSFKAGDELTKIEEEDDQGWCRGRLDSGRS---- 427

  Fly   652 GFVPTSYIE 660
            |..|.:|:|
Zfish   428 GLYPANYVE 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 32/200 (16%)
HR1_CIP4-like 412..488 CDD:212009 21/83 (25%)
SH3_CIP4-like 603..661 CDD:212844 17/58 (29%)
pacsin1aNP_001315286.1 BAR 18..270 CDD:299863 66/384 (17%)
SH3_PACSIN1-2 382..436 CDD:212931 17/64 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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