DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and itsn2b

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_005158835.1 Gene:itsn2b / 445153 ZFINID:ZDB-GENE-050309-102 Length:1837 Species:Danio rerio


Alignment Length:634 Identity:111/634 - (17%)
Similarity:218/634 - (34%) Gaps:191/634 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 RRLVKNYQPKKKEEEDNEF----------TSVQAFRNLLKEVG----DLAGQREVVSESLQL--- 158
            ||..:..|.:|.||:::..          ..::|..|..|::.    |..|::.:....|::   
Zfish   465 RRRKQELQNQKSEEQEDIIKLRAKKRSLEMELEAVGNKQKQISDKLRDAQGRKRIHKNELEMINQ 529

  Fly   159 ---QIIAGVTLLSKTLREERKKCLSDGATLQQNLTTQLSSL--------------------DRAK 200
               ..|..::.|.|.| |:.|:.|....:.||.||.:|.||                    |.:.
Zfish   530 KRDSCITEISSLQKQL-EDFKRKLGQSTSEQQKLTDKLRSLSLNSVPTATVKTLQNNMEEKDLSC 593

  Fly   201 RNYEKAYRDSEKA-------VDSYKRADMDL----NLSRAEVERYKNVMTSKIQQSDDAKNEYAN 254
            |..::.....||.       :|.||:...||    .:..:.:|:.:.:...||::....|.|   
Zfish   594 RKLKEQLNAVEKETAAKLADMDQYKKDIQDLRESQRMQESALEKLRTIKEEKIRELKKRKQE--- 655

  Fly   255 QLQKTNNLQQQHYSMLLPSV---LNRLQELDEKRTRGFREFIVGAADVESSVAPIIARCMEGIVK 316
            :|:|....:::...:.|...   ..:|:..:|::.|..:|      :.::.:.....|..:..::
Zfish   656 ELEKKRREEEEQKRIKLEKERQWQEKLRRDEEEKQRKIQE------ERDAKLREEEERERQARLQ 714

  Fly   317 AGE-------SINEKEDTFKVIERYQSGFTPPRDIPFEDLSKCDPDSVQDSHYSNSTSNHLTIRG 374
            |.:       ...|:|:..:..|..:......|.:..||..:.|.:                   
Zfish   715 AAKEQAERERKAREEEERRRREEEEERREQERRRLEEEDRRRRDEE------------------- 760

  Fly   375 TMSANKLKKRVGIFNIFGSNKNSLTADGQK-EDFSDLPPNQRRKKLQAKIAELTQNIAQETKARD 438
               ..||::          .:..|..:.:| ||       :|:::.:.::.|  :...:|.:..:
Zfish   761 ---RRKLEE----------ERRKLEEERRKLED-------ERKRQEEIRLKE--EREREERRRAE 803

  Fly   439 GLMKMKIVYEANSSLGNPMTVEGQLNESEHKLEKLKVDLKKYQG------FLEKASQVPTATSSP 497
            ...:.|               |.:..|.|.|.|:.:.:.::::.      ..|:..::.......
Zfish   804 EERRRK---------------EEERREEERKREREEEERRRHRAQEAAMRDAEERKRIEEERKRK 853

  Fly   498 QASRNQLQNGHRTSRHSNGSADDHHDDGDDQPDDAGSLSRSDSEDN---------VAQIQNGHNN 553
            :..|.:.:...|..|.......|.......|.::|.:....|.|.|         |:.:..|...
Zfish   854 EEERRKQEEEDRRRREEEQRKQDEERKRKQQQEEAAAARLRDDEQNKKNTVKSDLVSALLRGLEE 918

  Fly   554 NNNGSASPESGLGTSHTSLPGSGQGSANENAIGEDTYYETEVETLNPVGKCRALYPFEASSEGSI 618
            ...|    ...|||.|            ..:....|:              :|||||.|.:|..:
Zfish   919 RKGG----RRPLGTQH------------RRSAALTTF--------------KALYPFTARNEEEL 953

  Fly   619 PMSEGEELQVIEIDQGDGWTRVRRENNSNGW-------DEGFVPTSYIE 660
            .. |.::|  ||:|:.     |.||   .||       ..|:.|.||:|
Zfish   954 SF-ESDDL--IEVDES-----VERE---QGWLYGSWQGKMGWFPESYVE 991

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 49/261 (19%)
HR1_CIP4-like 412..488 CDD:212009 10/81 (12%)
SH3_CIP4-like 603..661 CDD:212844 22/65 (34%)
itsn2bXP_005158835.1 EH 7..99 CDD:197477
EH 19..83 CDD:238009
Amelogenin <80..183 CDD:197891
EH 232..327 CDD:197477
EH 243..308 CDD:238009
TAF4 <453..592 CDD:296797 27/127 (21%)
DUF4349 <559..691 CDD:305044 26/134 (19%)
SH3 936..992 CDD:302595 23/81 (28%)
SH3 1051..1102 CDD:302595
SH3_Intersectin_3 1126..1177 CDD:212772
SH3_Intersectin2_4 1198..1256 CDD:212927
SH3_Intersectin2_5 1271..1324 CDD:212929
RhoGEF 1355..1535 CDD:279015
PH_ITSN 1562..1692 CDD:270084
PH 1576..1684 CDD:278594
C2_Intersectin 1695..1829 CDD:176021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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