DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cip4 and Dap160

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001246118.1 Gene:Dap160 / 35378 FlyBaseID:FBgn0023388 Length:1190 Species:Drosophila melanogaster


Alignment Length:773 Identity:134/773 - (17%)
Similarity:268/773 - (34%) Gaps:275/773 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKKKLAQITKKK--TVADLEAE----CVHSAIA-FTCVRVCA--KL------------LASGSS 44
            :::.||.|:|..:  |::|::.:    |....:| |.|.:..|  |:            |....|
  Fly   219 LVQSKLPQVTLAQIWTLSDIDGDGRLNCDEFILAMFLCEKAMAGEKIPVTLPQEWVPPNLRKIKS 283

  Fly    45 RSSSNNKLAESENSAQNSNNMSWGTELWDQNENLAIHTNRGIDALD------------KFANFLR 97
            |..|.:.:.....|...|.:.|             :.:..|:..:|            :..|:::
  Fly   284 RPGSVSGVVSRPGSQPASRHAS-------------VSSQSGVGVVDADPTAGLPGQNKRKENYVK 335

  Fly    98 DRVAIETEYAGKLRRLVKNYQPKKKEEED---------NEFTSVQAFRNLLKEV-GDLAGQREVV 152
            .:..::     :.|:::::.|.|::||.:         .|...::|.|...:|: ..|..|||:.
  Fly   336 GQAELD-----RRRKIMEDQQRKEREERERKEREEADKREKARLEAERKQQEELERQLQRQREIE 395

  Fly   153 SE-------SLQLQIIAGVTLLSKTLRE---------------ERKKCLSDGATLQQNLTTQLSS 195
            .|       .|:.:..|...|..:..:|               |:::.|...|...| |..:||:
  Fly   396 MEKEEQRKRELEAKEAARKELEKQRQQEWEQARIAEMNAQKEREQERVLKQKAHNTQ-LNVELST 459

  Fly   196 LDRAKRNYEKAYRDSEKAVDSYK------RADMDLNLS-------RAEVERYKNVMTSKIQQSDD 247
            |:...:...:...|:...|.:.|      |...|.::|       |.:.:..|.:..::.:...:
  Fly   460 LNEKIKELSQRICDTRAGVTNVKTVIDGMRTQRDTSMSEMSQLKARIKEQNAKLLQLTQERAKWE 524

  Fly   248 AKNEYANQLQKTNNLQQQ-------HYSMLLPSVLNRLQELDEKRTRGFREFI----VGAADVES 301
            ||::.:.......|.||:       |..:::..:.::::.: .|.....:|.|    |..:::::
  Fly   525 AKSKASGAALGGENAQQEQLNAAFAHKQLIINQIKDKVENI-SKEIESKKEDINTNDVQMSELKA 588

  Fly   302 SVAPIIARCMEGIVKAGESINEKEDTFKVIERYQSGFTPPRDIPFEDLSKCDPDSVQDSHYSNST 366
            .::.:|.:|              ||.:|   .|....|...::.:...::....|..|:..|::.
  Fly   589 ELSALITKC--------------EDLYK---EYDVQRTSVLELKYNRKNETSVSSAWDTGSSSAW 636

  Fly   367 SNHLTIRGTMSANKLKKRVGIFNIFGSNKNSLTADGQKEDFSDLPPNQRRKKLQAKIAELTQNIA 431
            ..    .||.          :.:.:....|.::|                  |.|...:|     
  Fly   637 EE----TGTT----------VTDPYAVASNDISA------------------LAAPAVDL----- 664

  Fly   432 QETKARDGLMKMKIVYEANSSLGNPMT-------------------VEGQLNE-----SEHKLEK 472
             ...|.:|.:|.:.|||.|:.....:|                   :.|::|.     .|..:||
  Fly   665 -GGPAPEGFVKYQAVYEFNARNAEEITFVPGDIILVPLEQNAEPGWLAGEINGHTGWFPESYVEK 728

  Fly   473 LKVDLKKYQGFLEKASQVPTATSSPQASRNQLQNGHRTSRHSNGSADDHHDDGDDQPDDAGSLSR 537
            |:|           ....|.|..                               :.|.||     
  Fly   729 LEV-----------GEVAPVAAV-------------------------------EAPVDA----- 746

  Fly   538 SDSEDNVAQIQNGHNNNNNGSASPESGLGTSHTSLPGSGQGSANENAIGEDTYYETEVETLNPVG 602
                 .||.:.:.:|:|.|.|:.|.:               ||:..|.|:..||           
  Fly   747 -----QVATVADTYNDNINTSSIPAA---------------SADLTAAGDVEYY----------- 780

  Fly   603 KCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRVRRENNSNGWDEGFVPTSYIE 660
              .|.||:|::.||.:..|.||.:.||: .:|:.||      .:.|...|..|::|::
  Fly   781 --IAAYPYESAEEGDLSFSAGEMVMVIK-KEGEWWT------GTIGSRTGMFPSNYVQ 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 49/317 (15%)
HR1_CIP4-like 412..488 CDD:212009 18/99 (18%)
SH3_CIP4-like 603..661 CDD:212844 18/58 (31%)
Dap160NP_001246118.1 EH 7..101 CDD:197477
EH 18..83 CDD:238009
EH 184..279 CDD:197477 12/59 (20%)
EH 195..261 CDD:238009 10/41 (24%)
GBP_C <366..467 CDD:303769 21/101 (21%)
TACC 369..570 CDD:282818 36/202 (18%)
coiled coil 432..443 CDD:293879 1/10 (10%)
coiled coil 457..467 CDD:293879 3/9 (33%)
TBPIP <495..589 CDD:284512 13/94 (14%)
SH3_Intersectin_1 674..728 CDD:212770 9/53 (17%)
SH3_Intersectin_3 779..830 CDD:212772 20/71 (28%)
SH3_Intersectin_4 941..998 CDD:212773
SH3_Intersectin_5 1025..1077 CDD:212774
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.