DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and Fnbp1l

DIOPT Version :10

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_063138016.1 Gene:Fnbp1l / 310839 RGDID:1305386 Length:676 Species:Rattus norvegicus


Alignment Length:653 Identity:216/653 - (33%)
Similarity:340/653 - (52%) Gaps:125/653 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 DQNENLAIHTNRGIDALDKFANFLRDRVAIETEYAGKLRRLVKNYQPKK-KEEEDNEFTSVQAFR 136
            ||.::|..||..|||.|:::|.|:::|:.||..||.:||.|||.|.||: .::|:..|||..||.
  Rat    76 DQFDSLDKHTQWGIDFLERYAKFVKERIEIEQNYAKQLRNLVKKYCPKRSSKDEEPRFTSCIAFF 140

  Fly   137 NLLKEVGDLAGQREVVSESLQLQIIAGVTLLSKTLREERKKCLSDGATLQQNLTTQLSSLDRAKR 201
            |:|.|:.|.|||||||:|.:..::...:...:..|:.|||..|.:|...||.|......:|.:|:
  Rat   141 NILNELNDYAGQREVVAEEMAHRVYGELMRYAHDLKTERKMHLQEGRKAQQYLDMCWKQMDNSKK 205

  Fly   202 NYEKAYRDSEKAVDSYKRADMDLNLSRAEVERYKNVMTSKIQQSDDAKNEYANQLQKTNNLQQQH 266
            .:|:..|::|||..||:|.|.|.|.::|:||:.|..:..:...:|:.|||||.|||..|..|.:|
  Rat   206 KFERECREAEKAQQSYERLDNDTNATKADVEKAKQQLNLRTHMADENKNEYAAQLQNFNGEQHKH 270

  Fly   267 YSMLLPSVLNRLQELDEKRTRGFREFIVGAADVESSVAPIIARCMEGIVKAGESINEKEDTFKVI 331
            :.:::|.:..:|||:||:||....|...|.||.|..|.|||::|:||::.|.:|::|:.|:..|:
  Rat   271 FYVVIPQIYKQLQEMDERRTIKLSECYRGFADSERKVIPIISKCLEGMILAAKSVDERRDSQMVV 335

  Fly   332 ERYQSGFTPPRDIPFEDLSKCDPDSVQDSHYSNSTSNHLTIRGTMSANKLKKRVGIF-------- 388
            :.::|||.||.|.||||.|:....:|.|...|.|......:....:|.|.|.::.:|        
  Rat   336 DSFKSGFEPPGDFPFEDYSQHIYRTVSDGTISASKQEGGKMDSKSTAGKAKGKLWLFGKKPKPQS 400

  Fly   389 ------NIFGSNKN-------------------------------------SLTADGQKEDFSDL 410
                  ::|.|:..                                     |:......||||.|
  Rat   401 PPLTPTSLFTSSPPNGSQFLTLSIEPVHYCMNEIKTGKPRIPSFRSLKRGWSMKMGPALEDFSHL 465

  Fly   411 PPNQRRKKLQAKIAELTQNIAQETKARDGLMKMKIVYEANSSLGNPMTVEGQLNESEHKLEKLKV 475
            ||.|||||||.:|.||.:.:.:|:..::.|.|||.|||.|..:|:|.:::.:|.|:.:.:::|::
  Rat   466 PPEQRRKKLQQRIDELNRGLQKESDQKEALNKMKDVYEKNPQMGDPGSLQPKLAETMNNIDRLRM 530

  Fly   476 DLKKYQGFLEKASQVPTATSSPQASRNQLQNGHRTSRHSNGSADDHH--DDGDDQP-----DDAG 533
            ::.|.:.:|   |:|...|.         ..|.|  ||   |:|.:|  ..|.:.|     |||.
  Rat   531 EIHKNEAWL---SEVEGKTG---------VRGDR--RH---SSDINHLVTQGRESPEGSYTDDAN 578

  Fly   534 SLSRSDSEDNVAQIQNGHNNNNNGSASPESGLGTSHTSLPGSGQGSANENAIGEDTYYETEVETL 598
            ...|...:      |:||::.                                    ::.|.|..
  Rat   579 QEVRGPPQ------QHGHHSE------------------------------------FDDEFEDD 601

  Fly   599 NP---VGKCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRVRRENNSNGWDEGFVPTSYIE 660
            :|   :|.|:|:|||:..:||::.|.|||.|.:||.|:||||||.||:|.    :||:|||:||:
  Rat   602 DPLPAIGHCKAIYPFDGHNEGTLAMKEGEVLYIIEEDKGDGWTRARRQNG----EEGYVPTTYID 662

  Fly   661 ITL 663
            :||
  Rat   663 VTL 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 101/246 (41%)
HR1_CIP4-like 412..488 CDD:212009 27/75 (36%)
SH3_CIP4-like 603..661 CDD:212844 31/57 (54%)
Fnbp1lXP_063138016.1 None

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