DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and SRGAP2

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_011507656.1 Gene:SRGAP2 / 23380 HGNCID:19751 Length:1084 Species:Homo sapiens


Alignment Length:795 Identity:147/795 - (18%)
Similarity:249/795 - (31%) Gaps:240/795 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 ELWDQNENLAIHTNRGIDALDKFANFLRDRVAIETEYAGKLRRLVKNYQPKKKEEEDNEF----- 129
            :|.:|.:.|.......:..|....:|.|.:..||.:|:..|.:|.:.:..|.:..:|.:|     
Human    27 QLTEQMKCLDQQCELRVQLLQDLQDFFRKKAEIEMDYSRNLEKLAERFLAKTRSTKDQQFKKDQN 91

  Fly   130 --TSVQAFRNLLKEVGDLAGQREVVSESLQLQIIAGVTLLSKTLREERKKCLSDGATLQQNLTTQ 192
              :.|..:..||.:|...:.....:|:.....||.....:|:......||....|..||.:|...
Human    92 VLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKSKEVGQQLQDDLMKV 156

  Fly   193 LSSLDRAKRNYEKAYRDSEKAVDSYKRA-----------------------DMDLNLSRAEVERY 234
            |:.|....:.|.....||..|....|.|                       |...|: |.|.:..
Human   157 LNELYSVMKTYHMYNADSISAQSKLKEAEKQEEKQIGKSVKQEDRQTPRSPDSTANV-RIEEKHV 220

  Fly   235 KNVMTSKIQQSDD---------------AKNEYANQLQKTNNLQQQHYSMLLPSVLNRLQEL--D 282
            :.....||::..:               |:|||...|:.||....::|...|..::::..:|  .
Human   221 RRSSVKKIEKMKEKRQAKYTENKLKAIKARNEYLLALEATNASVFKYYIHDLSDLIDQCCDLGYH 285

  Fly   283 EKRTRGFREFIVGAADVESSVAPIIARCMEGIVKAGESINEKEDTFKVIERYQSGFTPPRDIPFE 347
            ....|..|.|:....::|.|.    ...::.|..|.|:::...|..:::|.|.:.|.||....|:
Human   286 ASLNRALRTFLSAELNLEQSK----HEGLDAIENAVENLDATSDKQRLMEMYNNVFCPPMKFEFQ 346

  Fly   348 ----DLSK--CDPDSVQ----------DSHYSNSTSNHLTIRGTMSA--NKLKKRVGI--FNIFG 392
                |::.  |....||          .|..|.....:..::.||.|  ..::..|.:  |::..
Human   347 PHMGDMASQLCAQQPVQSELVQRCQQLQSRLSTLKIENEEVKKTMEATLQTIQDIVTVEDFDVSD 411

  Fly   393 ----SNKNSLTADGQKEDFSDLPPNQRRK-------------------------KLQAKIAELTQ 428
                ||..........|.|...|...:|:                         ||||| .:|.|
Human   412 CFQYSNSMESVKSTVSETFMSKPSIAKRRANQQETEQFYFTKMKEYLEGRNLITKLQAK-HDLLQ 475

  Fly   429 NIAQETKARDGLM--KMKIVYEANSSLGNPMTVEGQLN-ESEHKLEKLKVDLKKYQGFLEKASQV 490
            ....|::..|..:  :...|.:.:||...|:.||..:. .|.|.|:        ::|...     
Human   476 KTLGESQRTDCSLARRSSTVRKQDSSQAIPLVVESCIRFISRHGLQ--------HEGIFR----- 527

  Fly   491 PTATSSPQASRNQLQNG-HRTSRHSNGSADDHHDD-----------GDDQP-------DDAGSLS 536
               .|..|...|.::|. .|......|..:||..|           |.:.|       .|..:..
Human   528 ---VSGSQVEVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKDIFHDLMACV 589

  Fly   537 RSD-------------------------------------SEDN--------------VAQIQNG 550
            ..|                                     ||:|              :..:..|
Human   590 TMDNLQERALHIRKVLLVLPKTTLIIMRYLFAFLNHLSQFSEENMMDPYNLAICFGPSLMSVPEG 654

  Fly   551 HN-----------------NNNNGSASP--------------ESGLGTSH---TSLPGSGQGSAN 581
            |:                 .:.|...||              |....:.|   ||:..|.|....
Human   655 HDQVSCQAHVNELIKTIIIQHENIFPSPRELEGPVYSRGGSMEDYCDSPHGETTSVEDSTQDVTA 719

  Fly   582 ENAIGEDTYYETEVETLNPVGKCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRVRRENNS 646
            |:...:|     |.|.:..:.|    :.:...:...:...:|..|.:.:....|.|     |...
Human   720 EHHTSDD-----ECEPIEAIAK----FDYVGRTARELSFKKGASLLLYQRASDDWW-----EGRH 770

  Fly   647 NGWDEGFVPTSYIEI 661
            ||.| |.:|..||.:
Human   771 NGID-GLIPHQYIVV 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 59/295 (20%)
HR1_CIP4-like 412..488 CDD:212009 20/103 (19%)
SH3_CIP4-like 603..661 CDD:212844 13/57 (23%)
SRGAP2XP_011507656.1 F-BAR_srGAP2 26..289 CDD:153366 52/262 (20%)
RhoGAP_srGAP 487..674 CDD:239848 28/202 (14%)
SH3_srGAP1-3 732..784 CDD:212888 13/61 (21%)
FTZ <953..1077 CDD:281812
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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