DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and Fchsd2

DIOPT Version :10

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_950177.2 Gene:Fchsd2 / 207278 MGIID:2448475 Length:764 Species:Mus musculus


Alignment Length:618 Identity:119/618 - (19%)
Similarity:246/618 - (39%) Gaps:145/618 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 DALDKFANFLRDRVAIETEYAGKLRRLVKNY----QPKKKEEEDNEFTSV-QAFRNLLKEVGDLA 146
            |.|:....|.:.:.|||.|||..:::|...|    .|..|.::.|::.|: ..:::.|:....:|
Mouse    34 DLLEDMRTFSQKKAAIEREYAQGIQKLASQYLKRDWPGIKTDDRNDYRSMYPVWKSFLEGTMQVA 98

  Fly   147 GQREVVSESLQLQIIAGVTLLSKTLREER-KKCLSDGATLQQNLTTQLSSLDRAKRNYEKAYRDS 210
            ..|..:.|:.: ..|:......::|:|:: |:|:.....:|..|...:..|.:.|:.|   :...
Mouse    99 QSRINICENYK-NFISEPARAVRSLKEQQLKRCVDQLTKIQTELQETVKDLVKGKKKY---FETE 159

  Fly   211 EKAVDSYKRADMD----LNLSRAEVERYKNVMTSKIQQSD------DAKNEYANQLQKTNNLQQQ 265
            :.|....::||::    |:|.::.:...|..:..|.::|:      .|:|:|...|...|..|.:
Mouse   160 QMAHAVREKADIEAKSKLSLFQSRISLQKASVKLKARRSECNTKATHARNDYLLTLAAANAHQDR 224

  Fly   266 HYSMLLPSVLNRLQELDEKRTRGFREFIVGAADVESSVAPIIARCMEGIVKAGESINEKEDTFKV 330
            :|.   ..::|.::.||.......:::::..:..|......|....:.::         |::.||
Mouse   225 YYQ---TDLVNIMKALDGNVYDHLKDYLIAFSRTELETCQAIQNTFQFLL---------ENSSKV 277

  Fly   331 IERY--------QSGFTPPRDIPFEDLSKCDPDS------VQDSHYSNSTSNHLTIRGTMSANKL 381
            :..|        .:.|..|:...|:   .||.|:      :.|...|..::..:||   ..:.:|
Mouse   278 VRDYNLQLFLQENAVFHKPQPFQFQ---PCDSDTSLKAAQLVDIELSPVSALRMTI---AESRQL 336

  Fly   382 KKRVGIFNIFGSNKNSLTADGQKEDFSDLPPNQRRKKLQAKIAELTQNIAQETKARDGLMKMKIV 446
            :...|.     :.::||              |:..:|...::|...:||..:.:..:.|....:.
Mouse   337 ESETGT-----TEEHSL--------------NKEARKWATRVAREHKNIVHQQRVLNELECHGVA 382

  Fly   447 YEANSSLGNPMTVEGQLNESEHKLEKLKVDLKKYQGFLEKASQVPTATSS-PQASRNQ----LQN 506
            ....|.    ..:|.:::|:...:.|.::...|.:..|:...|:..:..: .:::.||    |:|
Mouse   383 LSEQSR----AELEQKIDEARESIRKAEIIKLKAEARLDLLKQIGVSVDTWLKSAMNQVMEELEN 443

  Fly   507 GHRTSR----HSNG-----SADDHHDDGDDQPDDAGSLSRSDSEDNVAQIQNGHNNNNNGSASPE 562
             .|.:|    .|||     :||...::|:            :.|||:...       ::.|:||.
Mouse   444 -ERWARPPAVTSNGTLHSLNADAEREEGE------------EFEDNMDVF-------DDSSSSPS 488

  Fly   563 SGLGTSHTSLPGSGQGSANENAIGEDTYYETEVETLNPVGKCRALYPFEASSEGSIPMSEGEELQ 627
            ..|                      ..|..|          |:.:|.::||....:.:.|.|.|:
Mouse   489 GTL----------------------RNYPLT----------CKVVYSYKASQPDELTIEEHEVLE 521

  Fly   628 VIEIDQGDGWTRVRRENNSNGWDEGFVPTSYIE 660
            |||....:.|.:.|   |..| ..|:||..|::
Mouse   522 VIEDGDMEDWVKAR---NKVG-QVGYVPEKYLQ 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 49/247 (20%)
HR1_CIP4-like 412..488 CDD:212009 12/75 (16%)
SH3_CIP4-like 603..661 CDD:212844 18/58 (31%)
Fchsd2NP_950177.2 F-BAR_FCHSD2 16..275 CDD:153361 50/256 (20%)
SH3_FCHSD_1 495..551 CDD:212695 19/70 (27%)
SH3_FCHSD2_2 595..650 CDD:212827
Blue background indicates that the domain is not in the aligned region.

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