DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and sdpn-1

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001367622.1 Gene:sdpn-1 / 181058 WormBaseID:WBGene00018467 Length:495 Species:Caenorhabditis elegans


Alignment Length:617 Identity:107/617 - (17%)
Similarity:205/617 - (33%) Gaps:200/617 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 GIDALDKFANFLRDRVAIETEYAGKLRRLVKNYQPKKKEEEDNEFTSVQAFRNLLKEVGDLAGQR 149
            |::.||.:....|:|..||.:|:    :::..:..|.:...|...:               ||..
 Worm    32 GVEQLDDYCKMSRERAEIEAKYS----KMLSQHAEKWRAHVDRTVS---------------AGSV 77

  Fly   150 EVVSESLQLQIIAGVTLLSKTLREERKKCLSDGATLQQNLTTQLSSLDRAKRNYEKAYRDSEKAV 214
            :.|..    ::|...|.||: :....|.||.|. .:.:..|.:.:||..:.....|..|:.|   
 Worm    78 KTVWN----ELIGEATALSR-VHNSLKDCLIDD-IVNETTTYRKNSLHTSVFKGPKEIREIE--- 133

  Fly   215 DSYKRADMDLNLSRAEVERYKNVMTSKIQQSDDAKNEYANQLQKTN----NLQQ-QHYSMLLPSV 274
            |.:::|.          :.:|.:    :.:.:|.:.:|.|..::..    |||. |..:.:.|..
 Worm   134 DHFEKAQ----------KPWKKL----VDKMEDKRGKYYNVCRQEKSALVNLQNCQTDTSVSPDA 184

  Fly   275 LNRLQELDEK------RTR-GFREFIVGAADVES----SVAPIIARCMEGIVKAGESINEKEDTF 328
            ..:.:|..||      ||: .:::.:....:.::    ::|.:...|.|      :.::..:...
 Worm   185 ATKFRERHEKLKEEVQRTKVDYQKTLTNLNEYKNVYMEAMAHVFKMCQE------KEMDRSQFLI 243

  Fly   329 KVIERYQSGFTPPRDIPFEDLSKCDPDSVQDSHYSNSTSN----------HLTIRGTMSANKLKK 383
            .::::.|                        .||:|...|          ..:|| :..:..:|:
 Worm   244 GIVQKTQ------------------------RHYANIIRNSQMSGLHQQLEQSIR-SADSEAVKR 283

  Fly   384 RVGIFNIFGSNKNSLTADGQKEDFSDLPPNQRRKKLQAKIAELTQNIAQETKARDGLMKMKIVYE 448
            .:..:    |:.|.:.|..:...|.:..|..|             |||    ||.|..|     :
 Worm   284 DLAQW----SSVNGVDAFSEWPSFVEYSPEIR-------------NIA----ARGGSTK-----D 322

  Fly   449 ANSSLGNPMTVEGQLNESEHKLEKLKVDLKKYQGFLEKASQVPTATSSPQASRNQLQNGHRTSRH 513
            |..     :.:..|:|.||                     .:|                   |.|
 Worm   323 AGG-----VILTRQINRSE---------------------DIP-------------------STH 342

  Fly   514 SN-------GSADDHHDDGDDQPDDAGSLSRSDSEDNVAQIQNGHNNNNNGSASPESGLGTSHTS 571
            ||       .:|..|.|.|...|       :|.||.:.:...   :..:|.:|:.......:.|.
 Worm   343 SNTLPSVAVNTASSHEDVGKSSP-------KSSSESDTSTFD---SRKHNSTANKYKNQPQNTTQ 397

  Fly   572 L--------PGSGQGSANENAIGEDTYYETEVETLNPVGKCRALYPFEASSEGSIPMSEGEELQV 628
            :        |..|..|...:....|:....:.|..........||.:..:....|.:.:||.::|
 Worm   398 IQPPPVGWHPSDGPDSPPLSTETPDSAKYGDFEEFTTSKPAVVLYDYAPAEGDEIALRKGEMIEV 462

  Fly   629 IEIDQGDGWTRVRRENNSNGWDEGFVPTSYIE 660
            :......||...|...|     .|..|.||::
 Worm   463 LTEPDSLGWCTGRVSGN-----VGLFPASYVQ 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 46/249 (18%)
HR1_CIP4-like 412..488 CDD:212009 14/75 (19%)
SH3_CIP4-like 603..661 CDD:212844 14/58 (24%)
sdpn-1NP_001367622.1 F-BAR_PACSIN 16..273 CDD:153339 51/312 (16%)
SH3 437..489 CDD:418401 14/56 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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