DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and toca-2

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_499838.2 Gene:toca-2 / 176812 WormBaseID:WBGene00010663 Length:610 Species:Caenorhabditis elegans


Alignment Length:623 Identity:161/623 - (25%)
Similarity:308/623 - (49%) Gaps:62/623 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 DQNENLAIHTNRGIDALDKFANFLRDRVAIETEYAGKLRRLVKNYQPKKKEEEDNEFTSV---QA 134
            |.:..|..:|.:|||..:|...|.:::.|||.||:.|||.|.|.| .||.||:|....||   .:
 Worm    12 DPSNALLSYTQKGIDFFEKLGQFSKEKAAIEEEYSTKLRSLAKKY-AKKSEEDDEILKSVSYTSS 75

  Fly   135 FRNLLKEVGDLAGQREVVSESLQLQIIAGVTLLSKTLREERKKCLSDGATLQQNLTTQLSSLDRA 199
            |.:.|:::..:|.:.:..:|.::..:::.|...:..:|..||..::|..|:...|..|::.:.::
 Worm    76 FNSFLQQLDQIATRHQTSAEHIRGGVVSYVASKTCQMRSSRKNAINDLKTINDKLEDQINEMCKS 140

  Fly   200 KRNYEKAYRDSEKAVDSYKRADMDLNLSRAEVERYKNVMTSKIQQSDDAKNEYANQLQKTNNLQQ 264
            .:.|.|:::|:|.:...:.:||.:|.:||.|:|:.:.:..::.:..:.||.:|:..::|||..|:
 Worm   141 GKCYLKSFKDAENSYQKFYKADKNLEISRLELEKARALANARNEACELAKQDYSALVRKTNAEQK 205

  Fly   265 QHYSMLLPSVLNRLQELDEKRTRGFREFIVGAADVESSVAPIIARCMEGIVKAGESINEKEDTFK 329
            :::..|||.:..||:.:|::.....|:.:......:.|:|.....|.:.:.:....|:.:.|...
 Worm   206 RYHVELLPVIFARLKAVDKECIADMRQVLQKIVSFDDSLADSTEECRKIMQREVGKIDAEGDAQL 270

  Fly   330 VIERYQSGFTPPRDIPFEDLSKCDPDSVQDSHYSNST--SNHLTIRGTMSANK-LKKRVGIFNIF 391
            |::..::....|.....|||.  ||.:. ||..::|.  |....::.:.|.|: ::..:||....
 Worm   271 VLKSVEATIEQPAPFEIEDLG--DPKNC-DSRTNDSADGSGGKLLKSSPSKNRIIRNFLGILKEK 332

  Fly   392 GSNKNSLTADGQKEDFSD--LPPNQRRKKLQAKIAELTQNIAQETKARDGLMKMKIVYEANSSLG 454
            .:::....::..:..::|  .|.:.|...|::||.::.:.:.|..:.|:|:.:::..|..|...|
 Worm   333 EADEKPEASNNDQLMYTDKSKPAHVRLSCLRSKIRDMEKQLEQAIQGREGITRLQQAYYTNPQHG 397

  Fly   455 NPMTVEGQLNESEHKLEKLKVD---LKKYQGFLEKASQVPTATS-----SPQASRNQLQNGHRTS 511
            ||......|.....|:||||:|   ||::...||.:.:.....|     :|..:|:  .:|..|:
 Worm   398 NPSACTEPLISYAKKIEKLKMDIHNLKEFYAMLEMSVEEGQERSFGGRDTPDTTRS--MSGSSTN 460

  Fly   512 RHSNGSADDHHDDGDDQPDDAG-SLSRSDSEDNVAQIQNGHNNNNNGSASPESGLGTSHTSLP-- 573
            :.|:.:.:      |....:|| |.|..||..|:  ::..........:||:    ||.:|.|  
 Worm   461 QSSSKTIE------DVLSGEAGNSSSADDSSKNI--LRQLFTTPKRLISSPK----TSKSSTPTP 513

  Fly   574 --------------GSGQGSANENAIGEDTYYETEVETLNPVGKCRALYPFEASSEGSIPMSEGE 624
                          .|..|:..::....|:   .:|||...|   .||:.|..||..::.:.:||
 Worm   514 LRRRAEISSPKILRSSFSGAIRKSLSTPDS---VKVETAVTV---TALFEFAKSSAETMSIEQGE 572

  Fly   625 ELQVIEIDQGDGWTRVR--RENNSNGWDEGFVPTSYIE 660
            .|.|:|.|.||||||.:  |::|.   :.|||||||::
 Worm   573 ILLVLEHDHGDGWTRTKNCRKHNE---ESGFVPTSYLQ 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 66/248 (27%)
HR1_CIP4-like 412..488 CDD:212009 23/78 (29%)
SH3_CIP4-like 603..661 CDD:212844 26/60 (43%)
toca-2NP_499838.2 F-BAR_CIP4-like 8..267 CDD:153337 67/255 (26%)
HR1_CIP4-like 356..431 CDD:212009 21/74 (28%)
SH3_CIP4-like 551..608 CDD:212844 27/63 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165718
Domainoid 1 1.000 145 1.000 Domainoid score I2828
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51860
OrthoDB 1 1.010 - - D348563at2759
OrthoFinder 1 1.000 - - FOG0001169
OrthoInspector 1 1.000 - - otm14310
orthoMCL 1 0.900 - - OOG6_103782
Panther 1 1.100 - - O PTHR15735
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X890
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.860

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