DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and B0303.7

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_498918.3 Gene:B0303.7 / 176220 WormBaseID:WBGene00015128 Length:493 Species:Caenorhabditis elegans


Alignment Length:334 Identity:64/334 - (19%)
Similarity:113/334 - (33%) Gaps:99/334 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 TPPRDIPFEDLSKCDPDSVQDSHYSNSTSNHLTIRGTMSANKLKKRVGIFNIFGSNKNSLTADGQ 403
            ||||          .|:....|..||..:.::. ..|.|.:..|.      :|.|.|.       
 Worm     8 TPPR----------KPNICGTSGNSNGINENID-TSTFSVSAAKA------LFESAKR------- 48

  Fly   404 KEDFSDLPPNQRRKKLQAK----IAELTQNIAQETKARDGLMKMKIVYEANSSLGNPMTVEGQLN 464
                    |..|...:.|.    :.:..:|:||:.|||..::..    ..:.|.||.::....:.
 Worm    49 --------PEVRNAAIAAAKNPFVRQTAKNVAQDEKARGAVLNA----VKDPSGGNKISAAFAVA 101

  Fly   465 ESEHKLEKLKVDLKKYQGFLEKASQVPTATSSPQASRNQLQNGHRTSRHSNGSADDHHDDGDDQP 529
            ::..|.:.:... ..::|    .:.....:.|..|.|:||:|.|                     
 Worm   102 DANRKSDSVPPP-PPHRG----GTSPGKLSGSHSAIRSQLENMH--------------------- 140

  Fly   530 DDAGSLSRSDSEDNVAQIQNGHNNNNNGSASPESGLGTSHT-SLPGSGQGSANENAIGEDTYYET 593
             ..||:..|:|.......|:...::.:.||.........|| |:|               :|...
 Worm   141 -IGGSVMSSNSSTATPSYQSNSTSSYSSSAPVAPPPVPRHTQSIP---------------SYSAP 189

  Fly   594 EVETLNPVGKCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRVRRE----NNSNGWDEGFV 654
            .:.|  |.|..:..|....|.|..:.:  |:.:.:.:        :|..|    .|.|....|.|
 Worm   190 AIST--PYGIAKFDYAPTQSDEMGLRI--GDTVLISK--------KVDAEWFYGENQNQRTFGIV 242

  Fly   655 PTSYIEITL 663
            |:||::|.:
 Worm   243 PSSYLDIKI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337
HR1_CIP4-like 412..488 CDD:212009 14/79 (18%)
SH3_CIP4-like 603..661 CDD:212844 13/61 (21%)
B0303.7NP_498918.3 SH3 194..247 CDD:214620 14/62 (23%)
SH3 275..326 CDD:302595
SH3 356..409 CDD:214620
SH3 432..490 CDD:214620
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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