DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and Trip10

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_038938836.1 Gene:Trip10 / 116717 RGDID:621145 Length:603 Species:Rattus norvegicus


Alignment Length:663 Identity:226/663 - (34%)
Similarity:351/663 - (52%) Gaps:125/663 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 MSWGTELWDQNENLAIHTNRGIDALDKFANFLRDRVAIETEYAGKLRRLVKNYQPKKKEEEDNE- 128
            |.||||||||.|.|..||..|:|.|||:..|:::||.:|..||.:||.|||.|.||:..::|.| 
  Rat     1 MDWGTELWDQFEVLERHTQWGLDLLDKYVKFVKERVEVEQSYAKQLRSLVKKYLPKRPAKDDPEI 65

  Fly   129 -FTSVQAFRNLLKEVGDLAGQREVVSESLQLQIIAGVTLLSKTLREERKKCLSDGATLQQNLTTQ 192
             |:..|:|..||:||.|.|||||:|:|||.:::...:...|:.:::|||....:|...||.|...
  Rat    66 KFSQQQSFVQLLQEVNDFAGQRELVAESLGIRVCLELAKYSQEMKQERKMHFQEGRRAQQQLENG 130

  Fly   193 LSSLDRAKRNYEKAYRDSEKAVDSYKRADMDLNLSRAEVERYKNVMTSKIQQSDDAKNEYANQLQ 257
            ...|:.:||.:|:..|::|||..:.:|.|.|:|.::|:||:.|.....:...::::|||||.|||
  Rat   131 FKQLENSKRKFERDCREAEKAAHTAERLDQDINATKADVEKAKQQAHLRNHMAEESKNEYAAQLQ 195

  Fly   258 KTNNLQQQHYSMLLPSVLNRLQELDEKR-TRGFREFIVGA-----ADVESSVAPIIARCMEGIVK 316
            :.|..|...|...:|.:.::||::||:| ||      :||     ::.|..|.|||.:|:||:..
  Rat   196 RFNRDQAHFYFSQMPQIFDKLQDMDERRATR------LGAGYGLLSEAELQVVPIIGKCLEGMKV 254

  Fly   317 AGESINEKEDTFKVIERYQSGFTPPRDIPFEDLSKC-----------DPDSVQDSHYSNSTSN-- 368
            |.||::.|.|:..:||.::|||..|.|:.|||.|:.           .||...:...::|.|.  
  Rat   255 AAESVDAKNDSKVLIELHKSGFARPGDLEFEDFSQVMNRVPSDSSLGTPDGRPELRAASSRSRAK 319

  Fly   369 -------------HLTIRG-----TMS-------------------ANKLKKRVGIF-NIFGSNK 395
                         .|::.|     |:|                   :..:|.|:..| ::.||..
  Rat   320 RWPFGKKNKPRPPSLSLLGGHLPSTLSDGPSSPRSGRDPLAILSEISKSVKPRLASFRSLRGSRG 384

  Fly   396 NSLTADGQKEDFSDLPPNQRRKKLQAKIAELTQNIAQETKARDGLMKMKIVYEANSSLGNPMTVE 460
            ..:|     ||||.|||.|:||:||.::.|..:.:.:|...|:.|.|||.|||....:|:|.::|
  Rat   385 TVVT-----EDFSHLPPEQQRKRLQQQLEERNRELQKEEDQREALKKMKDVYEKTPQMGDPASLE 444

  Fly   461 GQLNESEHKLEKLKVDLKKYQGFLEKASQVPTATSSPQASRNQLQNGHRTSRHSNGSADDHHDDG 525
            .::.|:...:|:||::::||:.:|.:|.           ||.....|...|||:           
  Rat   445 PRIAETLGNIERLKLEVQKYEAWLAEAE-----------SRVLSNRGDSLSRHT----------- 487

  Fly   526 DDQPDDAGSLSRSDSEDNVAQIQNGHNNNNNGSASPESGLGTSHTSLPGSGQGSANENAIGEDTY 590
              :|.|..:.:..||..         ::||:||...:.           |.:...:|.  |:||.
  Rat   488 --RPPDPPTTAPPDSSS---------SSNNSGSQDNKE-----------SSEEPPSEE--GQDTP 528

  Fly   591 YETEV-----ETLNPVGKCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRVRRENNSNGWD 650
            ..||.     |..:|:|:|.|:|.||.||||::.|||||:|.::|.|:|||||||||:...    
  Rat   529 IYTEFDEDFEEPASPIGQCVAIYHFEGSSEGTVSMSEGEDLSLMEEDKGDGWTRVRRKQGG---- 589

  Fly   651 EGFVPTSYIEITL 663
            ||:|||||:.:||
  Rat   590 EGYVPTSYLRVTL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 102/257 (40%)
HR1_CIP4-like 412..488 CDD:212009 26/75 (35%)
SH3_CIP4-like 603..661 CDD:212844 33/57 (58%)
Trip10XP_038938836.1 F-BAR_CIP4-like 5..257 CDD:153337 102/257 (40%)
HR1_CIP4_FNBP1L 395..475 CDD:212018 29/90 (32%)
SH3_CIP4-like 546..600 CDD:212844 33/57 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2861
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 359 1.000 Inparanoid score I2141
OMA 1 1.010 - - QHG51860
OrthoDB 1 1.010 - - D348563at2759
OrthoFinder 1 1.000 - - FOG0001169
OrthoInspector 1 1.000 - - otm44676
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15735
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X890
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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