DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cip4 and trip10b

DIOPT Version :9

Sequence 1:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_956518.1 Gene:trip10b / 108179043 ZFINID:ZDB-GENE-040426-969 Length:512 Species:Danio rerio


Alignment Length:606 Identity:199/606 - (32%)
Similarity:324/606 - (53%) Gaps:104/606 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 MSWGTELWDQNENLAIHTNRGIDALDKFANFLRDRVAIETEYAGKLRRLVKNYQPK-KKEEEDNE 128
            |.||:.||||::.:..||..|:|.|:::..|:::|..||..|:.:||.|.|.|..: .||::|.:
Zfish     1 MDWGSALWDQHDAIERHTQSGLDLLERYMKFVKERAEIEQNYSKQLRNLCKKYTRRGSKEDQDTK 65

  Fly   129 FTSVQAFRNLLKEVGDLAGQREVVSESLQLQIIAGVTLLSKTLREERKKCLSDGATLQQNLTTQL 193
            ..|.|.|:::|.::.|.|||||.:|:||.:.|...::.....||:|||..|::....||||.:..
Zfish    66 LVSQQGFQDVLCQLNDYAGQREQLSDSLTVGICVELSRSLTELRQERKNHLAEIKKAQQNLESSF 130

  Fly   194 SSLDRAKRNYEKAYRDSEKAVDSYKRADMDLNLSRAEVERYKNVMTSKIQQSDDAKNEYANQLQK 258
            ..|:.:||.:||.::::|||....::.:.|.:.::|:|::.|.....:|..:|:.|||||:||||
Zfish   131 KQLESSKRRFEKEWKEAEKANQQTEKVEQDASATKADVDKAKQHANVRIHFADECKNEYASQLQK 195

  Fly   259 TNNLQQQHYSMLLPSVLNRLQELDEKRTRGFREFIVGAADVESSVAPIIARCMEGIVKAGESINE 323
            .|..|..:|...:|.|..:||:|:|:......:..|..:|.|..:.|.|.:|::.|:.:|..|:|
Zfish   196 YNKEQNNYYYADIPFVYKKLQDLEERCVPMLADGYVQFSDSEKKILPNINKCLDSIISSGRRIDE 260

  Fly   324 KEDTFKVIERYQSGFTPPRDIPFEDLSKCDPDSVQDSHYSNSTSNHLTIRGTMSANKLKKRVGIF 388
            |:||..:||:|:||..||.|:.|||.|:    :|:.:...|:.  ||            .:|.|.
Zfish   261 KQDTLALIEQYKSGAVPPADVEFEDFSQ----AVKPAAAENTA--HL------------PKVRIK 307

  Fly   389 NIFGSNKNSLTADGQ-----KEDFSDLPPNQRRKKLQAKIAELTQNIAQETKARDGLMKMKIVYE 448
            .:| ..||.:|:..:     :||.|.|||:|||::||.|:.|:.:.:.:|.:..:.|||||.|||
Zfish   308 QLF-LKKNKVTSPDKPMPCSQEDLSRLPPDQRRRRLQEKVEEVQKELQKELEQSEALMKMKGVYE 371

  Fly   449 ANSSLGNPMTVEGQLNESEHKLEKLKVDLKKYQGFLEKASQVPTATSSPQASRNQLQNGHRTSRH 513
            .||.||:|.:::.|:.::.|.:.:|:.:|||.|..|.:|                   |..|.::
Zfish   372 QNSQLGDPASLQPQITQTAHNIARLRGELKKQQVQLTEA-------------------GGGTIKY 417

  Fly   514 SNGSADDHHDDGDDQPDDAGSLSRSDSEDNVAQIQNGHNNNNNGSASPESGLGTSHTSLPGSGQG 578
            ...|:           :....||.|                   |.||..               
Zfish   418 YPSSS-----------EYISVLSES-------------------SVSPTD--------------- 437

  Fly   579 SANENAIGEDTY---YETEVETLNPVGKCRALYPFEASSEGSIPMSEGEELQVIEIDQGDGWTRV 640
                    |:.|   ::.:.::..|:.:|||||.|:.|||||:.||.||:|.|::.||||||.||
Zfish   438 --------EELYECDFDEDFDSDMPIAQCRALYDFDGSSEGSVSMSVGEQLSVMDQDQGDGWVRV 494

  Fly   641 RRENNSNGWDEGFVPTSYIEI 661
            ::   |.| |.|:||.|||:|
Zfish   495 QK---STG-DVGYVPASYIQI 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 85/250 (34%)
HR1_CIP4-like 412..488 CDD:212009 30/75 (40%)
SH3_CIP4-like 603..661 CDD:212844 34/57 (60%)
trip10bNP_956518.1 F-BAR_CIP4-like 7..255 CDD:153337 85/247 (34%)
HR1_CIP4_FNBP1L 334..414 CDD:212018 33/98 (34%)
SH3_CIP4-like 457..511 CDD:212844 34/57 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593545
Domainoid 1 1.000 75 1.000 Domainoid score I8992
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51860
OrthoDB 1 1.010 - - D348563at2759
OrthoFinder 1 1.000 - - FOG0001169
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15735
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X890
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.960

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