DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMP34 and DAL2

DIOPT Version :9

Sequence 1:NP_001246615.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_012295.1 Gene:DAL2 / 854847 SGDID:S000001468 Length:343 Species:Saccharomyces cerevisiae


Alignment Length:37 Identity:11/37 - (29%)
Similarity:15/37 - (40%) Gaps:10/37 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 KESDSKPSTSAG----------STPRTESTLELMISI 269
            |||:|..:|..|          :.|..|...|:..||
Yeast   284 KESESSENTGEGTWVELVGKSKTGPDKEHVYEIRKSI 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_001246615.1 Mito_carr 15..96 CDD:278578
Mito_carr 105..202 CDD:278578
Mito_carr 214..303 CDD:278578 11/37 (30%)
DAL2NP_012295.1 Alc 1..343 CDD:355631 11/37 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.