Protein Alignment PMP34 and RIM2

DIOPT Version :9

• Sequence 1: NP_001246615.1
• Gene: PMP34 / 38532
• FlyBaseID: FBgn0052250
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_009751.1
• Gene: RIM2 / 852491
• SGDID: S000000396
• Length: 377
• Species: Saccharomyces cerevisiae
• Alignment Length: 339
• Identity: 84/339 - (24%)
• Similarity: 145/339 - (42%)
• Gaps: 74/339 - (21%)

  Fly    16 FVHAVSGAAGGCIAMSTFYPLDTVRSRLQLE---------------------------EAG-DVR 52
            :||.|:|..||........|.|.|::|||.:                           :|| ..:
Yeast    53 WVHFVAGGIGGMAGAVVTCPFDLVKTRLQSDIFLKAYKSQAVNISKGSTRPKSINYVIQAGTHFK 117

  Fly    53 STRQVIKEIVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAV-ASGGSPSQHSALKDLLLG 116
            .|..:|..:...|||:||::||||.|..:..:..:.|:|:...|.: |...:..|.:.:..|:..
Yeast   118 ETLGIIGNVYKQEGFRSLFKGLGPNLVGVIPARSINFFTYGTTKDMYAKAFNNGQETPMIHLMAA 182

  Fly   117 SIAGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLM 181
            :.||......|.|.|::.||:::.....||   .:.|||..:.||.|...||..||:.|...|.:
Yeast   183 ATAGWATATATNPIWLIKTRVQLDKAGKTS---VRQYKNSWDCLKSVIRNEGFTGLYKGLSASYL 244

  Fly   182 LVSNPALQFMMYEMLK-----RNIMRF-------------------TGGEMGSLSFFFIGAIAKA 222
            ......||:::||.:|     |:|.:|                   ..|..|         :||.
Yeast   245 GSVEGILQWLLYEQMKRLIKERSIEKFGYQAEGTKSTSEKVKEWCQRSGSAG---------LAKF 300

  Fly   223 FATVLTYPLQLVQTKQRHRSKESDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKIL 287
            .|::.|||.::|:|:.|...||:..:..|         ..::....|::.:|:..::.||...::
Yeast   301 VASIATYPHEVVRTRLRQTPKENGKRKYT---------GLVQSFKVIIKEEGLFSMYSGLTPHLM 356

  Fly   288 QTVLTAALMFMAYE 301
            :||..:.:||..:|
Yeast   357 RTVPNSIIMFGTWE 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PMP34	NP_001246615.1	Mito_carr	15..96	CDD:278578	28/107 (26%)
		Mito_carr	105..202	CDD:278578	30/101 (30%)
		Mito_carr	214..303	CDD:278578	21/88 (24%)
RIM2	NP_009751.1	PTZ00169	<72..264	CDD:240302	52/194 (27%)
		Mito_carr	294..377	CDD:395101	22/95 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG4266
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53601
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820