DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMP34 and AT5G48970

DIOPT Version :10

Sequence 1:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_199708.1 Gene:AT5G48970 / 834956 AraportID:AT5G48970 Length:339 Species:Arabidopsis thaliana


Alignment Length:341 Identity:85/341 - (24%)
Similarity:144/341 - (42%) Gaps:67/341 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PSKLSQVLSYQNFVHAVSGAAGGCIAMSTFYPLDTVRSRLQLE-------------------EAG 49
            |.::.:.|     :.|.:||..|.::.|...|||.::.|.|::                   ..|
plant    12 PGQIKRAL-----IDASAGAISGGVSRSVTSPLDVIKIRFQVQLEPTTSWGLVRGNLSGASKYTG 71

  Fly    50 DVRSTRQVIKEIVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASGGSPSQ-HSALKDL 113
            .|::|:.:.:|    |||:..:||..|.|..:.....:.|...|.||:.|||.:.:: |..|...
plant    72 MVQATKDIFRE----EGFRGFWRGNVPALLMVMPYTSIQFTVLHKLKSFASGSTKTEDHIHLSPY 132

  Fly   114 L---LGSIAGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSG 175
            |   .|::||....|.:.||.::.|.|       .|....|.|..:......:.:..||.||::|
plant   133 LSFVSGALAGCAATLGSYPFDLLRTIL-------ASQGEPKVYPTMRSAFVDIIQSRGIRGLYNG 190

  Fly   176 TIPSLM-LVSNPALQFMMYEMLKRNIMRF------------TGGEMGSLSFFFIGAIAKAFATVL 227
            ..|:|: :|....|||..|:|.||.:|.:            ....:.|...|..|..|...|.::
plant   191 LTPTLVEIVPYAGLQFGTYDMFKRWMMDWNRYKLSSKIPINVDTNLSSFQLFICGLGAGTSAKLV 255

  Fly   228 TYPLQLVQTK------QRHRSKESDSKPSTSAGSTPRT-ESTLELMISILQHQGIRGLFRGLEAK 285
            .:||.:|:.:      |||        |...|....|. .:.|:.:..|:..:|..||::|:...
plant   256 CHPLDVVKKRFQIEGLQRH--------PRYGARVERRAYRNMLDGLRQIMISEGWHGLYKGIVPS 312

  Fly   286 ILQTVLTAALMFMAYE 301
            .::.....|:.|:|||
plant   313 TVKAAPAGAVTFVAYE 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 23/99 (23%)
Mito_carr 105..202 CDD:395101 29/101 (29%)
Mito_carr 214..303 CDD:395101 24/95 (25%)
AT5G48970NP_199708.1 Mito_carr 18..116 CDD:395101 26/106 (25%)
Mito_carr 128..218 CDD:395101 28/96 (29%)
Mito_carr 236..334 CDD:395101 25/101 (25%)

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